2022

Akama-Garren EH, Carroll MC. T cell help in the autoreactive germinal center. Scand J Immunol. 2022 Jun;95(6):e13192. doi: 10.1111/sji.13192. Epub 2022 May 31. PMID: 35587582; PMCID: PMC9250425.

Akama-Garren EH, Carroll MC. Lupus Susceptibility Loci Predispose Mice to Clonal Lymphocytic Responses and Myeloid Expansion. J Immunol. 2022 May 15;208(10):2403-2424. doi: 10.4049/jimmunol.2200098. Epub 2022 Apr 27. PMID: 35477687; PMCID: PMC9254690.

Qian X, DeGennaro EM, Talukdar M, Akula SK, Lai A, Shao DD, Gonzalez D, Marciano JH, Smith RS, Hylton NK, Yang E, Bazan JF, Barrett L, Yeh RC, Hill RS, Beck SG, Otani A, Angad J, Mitani T, Posey JE, Pehlivan D, Calame D, Aydin H, Yesilbas O, Parks KC, Argilli E, England E, Im K, Taranath A, Scott HS, Barnett CP, Arts P, Sherr EH, Lupski JR, Walsh CA. Loss of non-motor kinesin KIF26A causes congenital brain malformations via dysregulated neuronal migration and axonal growth as well as apoptosis. Dev Cell. 2022 Oct 7:S1534-5807(22)00681-5. doi: 10.1016/j.devcel.2022.09.011. Epub ahead of print. PMID: 36228617.

Anderson JR, Li J, Springer TA, Brown A. Structures of VWF tubules before and after concatemerization reveal a mechanism of disulfide bond exchange. Blood. 2022 Sep 22;140(12):1419-1430. doi: 10.1182/blood.2022016467. PMID: 35776905.

Borja AJ, Saini J, Raynor WY, Ayubcha C, Werner TJ, Alavi A, Revheim ME, Nagaraj C. Role of Molecular Imaging with PET/MR Imaging in the Diagnosis and Management of Brain Tumors. PET Clin. 2022 Jul;17(3):431-451. doi: 10.1016/j.cpet.2022.03.002. Epub 2022 May 31. PMID: 35662494.

Zirakchian Zadeh M, Ayubcha C, Raynor WY, Werner TJ, Alavi A. A review of different methods used for quantification and assessment of FDG-PET/CT in multiple myeloma. Nucl Med Commun. 2022 Apr 1;43(4):378-391. doi: 10.1097/MNM.0000000000001528. PMID: 35102074.

Howard MT, Wang S, Berger AG, Martin JR, Jalili-Firoozinezhad S, Padera RF, Hammond PT. Sustained release of BMP-2 using self-assembled layer-by-layer film-coated implants enhances bone regeneration over burst release. Biomaterials. 2022 Sep;288:121721. doi: 10.1016/j.biomaterials.2022.121721. Epub 2022 Aug 10. PMID: 35981926.

He Y, Hong C, Fletcher SJ, Berger AG, Sun X, Yang M, Huang S, Belcher AM, Irvine DJ, Li J, Hammond PT. Peptide-Based Cancer Vaccine Delivery via the STINGΔTM-cGAMP Complex. Adv Healthc Mater. 2022 Aug;11(15):e2200905. doi: 10.1002/adhm.202200905. Epub 2022 Jun 19. PMID: 35670244.

Boehnke N, Straehla JP, Safford HC, Kocak M, Rees MG, Ronan M, Rosenberg D, Adelmann CH, Chivukula RR, Nabar N, Berger AG, Lamson NG, Cheah JH, Li H, Roth JA, Koehler AN, Hammond PT. Massively parallel pooled screening reveals genomic determinants of nanoparticle delivery. Science. 2022 Jul 22;377(6604):eabm5551. doi: 10.1126/science.abm5551. Epub 2022 Jul 22. PMID: 35862544.

Bever AM, Song M. Early life exposures and adulthood cancer risk: a life course perspective. J Natl Cancer Inst. 2022 Oct 10:djac193. doi: 10.1093/jnci/djac193. Epub ahead of print. PMID: 36214630.

Cote DJ, Bever AM, Chiu YH, Sandoval-Insausti H, Smith-Warner SA, Chavarro JE, Stampfer MJ. Pesticide Residue Intake From Fruit and Vegetable Consumption and Risk of Glioma. Am J Epidemiol. 2022 Mar 24;191(5):825-833. doi: 10.1093/aje/kwac007. PMID: 35029641; PMCID: PMC9430420.

Bever AM, Hang D, He X, Joshi AD, Ding M, Wu K, Chan AT, Giovannucci EL, Song M. Genetic Obesity Variants and Risk of Conventional Adenomas and Serrated Polyps. Dig Dis Sci. 2022 Aug;67(8):4078-4085. doi: 10.1007/s10620-021-07193-x. Epub 2021 Aug 17. PMID: 34403030; PMCID: PMC9255950.

Yirga A, Beyer L, Patt E, Tolchin D. Including disability in the equity and diversity conversation: Honing advocacy skills through curriculum development. Journal of the HMS Academy 2(3). March 2022.

Hauser BM, Sangesland M, St Denis KJ, Lam EC, Case JB, Windsor IW, Feldman J, Caradonna TM, Kannegieter T, Diamond MS, Balazs AB, Lingwood D, Schmidt AG. Rationally designed immunogens enable immune focusing following SARS-CoV-2 spike imprinting. Cell Rep. 2022 Mar 22;38(12):110561. doi: 10.1016/j.celrep.2022.110561. Epub 2022 Mar 7. PMID: 35303475; PMCID: PMC8898741.

Nanishi E, Borriello F, O'Meara TR, McGrath ME, Saito Y, Haupt RE, Seo HS, van Haren SD, Cavazzoni CB, Brook B, Barman S, Chen J, Diray-Arce J, Doss-Gollin S, De Leon M, Prevost-Reilly A, Chew K, Menon M, Song K, Xu AZ, Caradonna TM, Feldman J, Hauser BM, Schmidt AG, Sherman AC, Baden LR, Ernst RK, Dillen C, Weston SM, Johnson RM, Hammond HL, Mayer R, Burke A, Bottazzi ME, Hotez PJ, Strych U, Chang A, Yu J, Sage PT, Barouch DH, Dhe-Paganon S, Zanoni I, Ozonoff A, Frieman MB, Levy O, Dowling DJ. An aluminum hydroxide:CpG adjuvant enhances protection elicited by a SARS-CoV-2 receptor binding domain vaccine in aged mice. Sci Transl Med. 2022 Jan 26;14(629):eabj5305. doi: 10.1126/scitranslmed.abj5305. Epub 2022 Jan 26. PMID: 34783582.

Branham DK, Finegold K, Chen L, Sorbero M, Euller R, Elliott MN, Sommers BD. Trends in Missing Race and Ethnicity Information After Imputation in HealthCare.gov Marketplace Enrollment Data, 2015-2021. JAMA Netw Open. 2022 Jun 1;5(6):e2216715. doi: 10.1001/jamanetworkopen.2022.16715. PMID: 35687340; PMCID: PMC9187953.

Rokicki S, Steenland MW, Geiger CK, Gourevitch RA, Chen L, Martin MW, Cohen JL. Trends in postpartum mental health care before and during COVID-19. Health Serv Res. 2022 Aug 19:10.1111/1475-6773.14051. doi: 10.1111/1475-6773.14051. Epub ahead of print. PMID: 36059179; PMCID: PMC9539265.

Yang D, Jones MG, Naranjo S, Rideout WM 3rd, Min KHJ, Ho R, Wu W, Replogle JM, Page JL, Quinn JJ, Horns F, Qiu X, Chen MZ, Freed-Pastor WA, McGinnis CS, Patterson DM, Gartner ZJ, Chow ED, Bivona TG, Chan MM, Yosef N, Jacks T, Weissman JS. Lineage tracing reveals the phylodynamics, plasticity, and paths of tumor evolution. Cell. 2022 May 26;185(11):1905-1923.e25. doi: 10.1016/j.cell.2022.04.015. Epub 2022 May 5. PMID: 35523183; PMCID: PMC9452598.

Chang SM, Vander Heiden MG. Inhibiting GLUTtony in cancer. Cell Chem Biol. 2022 Mar 17;29(3):353-355. doi: 10.1016/j.chembiol.2022.03.004. PMID: 35303439.

Clark LE, Clark SA, Lin C, Liu J, Coscia A, Nabel KG, Yang P, Neel DV, Lee H, Brusic V, Stryapunina I, Plante KS, Ahmed AA, Catteruccia F, Young-Pearse TL, Chiu IM, Llopis PM, Weaver SC, Abraham J. VLDLR and ApoER2 are receptors for multiple alphaviruses. Nature. 2022 Feb;602(7897):475-480. doi: 10.1038/s41586-021-04326-0. Epub 2021 Dec 20. PMID: 34929721; PMCID: PMC8808280.

Nabel KG, Clark SA, Shankar S, Pan J, Clark LE, Yang P, Coscia A, McKay LGA, Varnum HH, Brusic V, Tolan NV, Zhou G, Desjardins M, Turbett SE, Kanjilal S, Sherman AC, Dighe A, LaRocque RC, Ryan ET, Tylek C, Cohen-Solal JF, Darcy AT, Tavella D, Clabbers A, Fan Y, Griffiths A, Correia IR, Seagal J, Baden LR, Charles RC, Abraham J. Structural basis for continued antibody evasion by the SARS-CoV-2 receptor binding domain. Science. 2022 Jan 21;375(6578):eabl6251. doi: 10.1126/science.abl6251. Epub 2022 Jan 21. PMID: 34855508.

Cote DJ, Bever AM, Chiu YH, Sandoval-Insausti H, Smith-Warner SA, Chavarro JE, Stampfer MJ. Pesticide Residue Intake From Fruit and Vegetable Consumption and Risk of Glioma. Am J Epidemiol. 2022 Mar 24;191(5):825-833. doi: 10.1093/aje/kwac007. PMID: 35029641; PMCID: PMC9430420.

Dannenberg PH, Kang J, Martino N, Kashiparekh A, Forward S, Wu J, Liapis AC, Wang J, Yun SH. Laser particle activated cell sorting in microfluidics. Lab Chip. 2022 Jun 14;22(12):2343-2351. doi: 10.1039/d2lc00235c. PMID: 35621381; PMCID: PMC9195882.

Miller AB, Davis SH, Mulder LA, Winer JP, Issa OM, Cardeli E, Ellis BH. Leveraging community-based mental health services to reduce inequities for children and families living in United States who have experienced migration-related trauma. Psychol Trauma. 2022 Oct 27. doi: 10.1037/tra0001392. Epub ahead of print. PMID: 36301293.

Franklin R, Guo Y, He S, Chen M, Ji F, Zhou X, Frankhouser D, Do BT, Chiem C, Jang M, Blanco MA, Vander Heiden MG, Rockne RC, Ninova M, Sykes DB, Hochedlinger K, Lu R, Sadreyev RI, Murn J, Volk A, Cheloufi S. Regulation of chromatin accessibility by the histone chaperone CAF-1 sustains lineage fidelity. Nat Commun. 2022 Apr 29;13(1):2350. doi: 10.1038/s41467-022-29730-6. PMID: 35487911; PMCID: PMC9054786.

Diehl FF, Miettinen TP, Elbashir R, Nabel CS, Darnell AM, Do BT, Manalis SR, Lewis CA, Vander Heiden MG. Nucleotide imbalance decouples cell growth from cell proliferation. Nat Cell Biol. 2022 Aug;24(8):1252-1264. doi: 10.1038/s41556-022-00965-1. Epub 2022 Aug 4. PMID: 35927450; PMCID: PMC9359916.

Do BT, Vander Heiden MG. GOT2 consider the tumor microenvironment. Trends Cancer. 2022 Nov;8(11):884-886. doi: 10.1016/j.trecan.2022.09.004. Epub 2022 Sep 21. PMID: 36153305.

Drosu N, Giovannoni G, Lechner-Scott J, Hawkes C, Yeh A, Levy M. EBV as the "gluten of MS" hypothesis provides a rationale for trialing antiviral therapies. Mult Scler Relat Disord. 2022 Aug;64:104007. doi: 10.1016/j.msard.2022.104007. Epub 2022 Jul 1. PMID: 35803161.

Chamzas* C., F. Eweje*, L. E. Kavraki, and E. L. Chaikof. 2022. Human Health and Equity in an Age of Robotics and Intelligent Machines. NAM Perspectives. Commentary, National Academy of Medicine, Washington, DC. https://doi.org/10.31478/202203b.

Whitman MC, Gilette NM, Bell JL, Kim SA, Tischfield M, Engle EC. TWIST1, a gene associated with Saethre-Chotzen syndrome, regulates extraocular muscle organization in mouse. Dev Biol. 2022 Oct;490:126-133. doi: 10.1016/j.ydbio.2022.07.010. Epub 2022 Aug 6. PMID: 35944701.

Jakob AMV, Mikhael JG, Hamilos AE, Assad JA, Gershman SJ. Dopamine mediates the bidirectional update of interval timing. Behav Neurosci. 2022 Oct;136(5):445-452. doi: 10.1037/bne0000529. PMID: 36222637.

Hoffman SE, Hauser BM, Zaki MM, Gupta S, Chua M, Bernstock JD, Khawaja AM, Smith TR, Zaidi HA. Spinal level and cord involvement in the prediction of sepsis development after vertebral fracture repair for traumatic spinal injury. J Neurosurg Spine. 2022 Feb 4:1-7. doi: 10.3171/2021.12.SPINE21423. Epub ahead of print. PMID: 35120317.

Amraei R, Xia C, Olejnik J, White MR, Napoleon MA, Lotfollahzadeh S, Hauser BM, Schmidt AG, Chitalia V, Mühlberger E, Costello CE, Rahimi N. Extracellular vimentin is an attachment factor that facilitates SARS-CoV-2 entry into human endothelial cells. Proc Natl Acad Sci U S A. 2022 Feb 8;119(6):e2113874119. doi: 10.1073/pnas.2113874119. PMID: 35078919.

Garcia-Beltran WF, St Denis KJ, Hoelzemer A, Lam EC, Nitido AD, Sheehan ML, Berrios C, Ofoman O, Chang CC, Hauser BM, Feldman J, Roederer AL, Gregory DJ, Poznansky MC, Schmidt AG, Iafrate AJ, Naranbhai V, Balazs AB. mRNA-based COVID-19 vaccine boosters induce neutralizing immunity against SARS-CoV-2 Omicron variant. Cell. 2022 Feb 3;185(3):457-466.e4. doi: 10.1016/j.cell.2021.12.033. Epub 2022 Jan 6. PMID: 34995482; PMCID: PMC8733787.

Hauser BM, Sangesland M, St Denis KJ, Lam EC, Case JB, Windsor IW, Feldman J, Caradonna TM, Kannegieter T, Diamond MS, Balazs AB, Lingwood D, Schmidt AG. Rationally designed immunogens enable immune focusing following SARS-CoV-2 spike imprinting. Cell Rep. 2022 Mar 22;38(12):110561. doi: 10.1016/j.celrep.2022.110561. Epub 2022 Mar 7. PMID: 35303475; PMCID: PMC8898741.

Tan CS, Collier AY, Yu J, Liu J, Chandrashekar A, McMahan K, Jacob-Dolan C, He X, Roy V, Hauser BM, Munt JE, Mallory ML, Mattocks M, Powers JM, Meganck RM, Rowe M, Hemond R, Bondzie EA, Jaegle KH, Baric RS, Schmidt AG, Alter G, Le Gars M, Sadoff J, Barouch DH. Durability of Heterologous and Homologous COVID-19 Vaccine Boosts. JAMA Netw Open. 2022 Aug 1;5(8):e2226335. doi: 10.1001/jamanetworkopen.2022.26335. PMID: 35947380; PMCID: PMC9366542.

Rosenberg A, Jayaram A, Still M, Hauser B, Dworkin M, Faktor K, Petroze R. Global Surgery Opportunities for General Surgery Residents: Are We Making Progress? J Surg Res. 2022 Nov;279:436-441. doi: 10.1016/j.jss.2022.06.043. Epub 2022 Jul 13. PMID: 35841812.

InciSioN Collaborative (Hauser, BM). International Survey of Medical Students Exposure to Relevant Global Surgery (ISOMERS): A Cross-Sectional Study. World J Surg. 2022 Jul;46(7):1577-1584. doi: 10.1007/s00268-022-06440-0. Epub 2022 Feb 1. PMID: 35106648; PMCID: PMC9174132.

Nanishi E, Borriello F, O'Meara TR, McGrath ME, Saito Y, Haupt RE, Seo HS, van Haren SD, Cavazzoni CB, Brook B, Barman S, Chen J, Diray-Arce J, Doss-Gollin S, De Leon M, Prevost-Reilly A, Chew K, Menon M, Song K, Xu AZ, Caradonna TM, Feldman J, Hauser BM, Schmidt AG, Sherman AC, Baden LR, Ernst RK, Dillen C, Weston SM, Johnson RM, Hammond HL, Mayer R, Burke A, Bottazzi ME, Hotez PJ, Strych U, Chang A, Yu J, Sage PT, Barouch DH, Dhe-Paganon S, Zanoni I, Ozonoff A, Frieman MB, Levy O, Dowling DJ. An aluminum hydroxide:CpG adjuvant enhances protection elicited by a SARS-CoV-2 receptor binding domain vaccine in aged mice. Sci Transl Med. 2022 Jan 26;14(629):eabj5305. doi: 10.1126/scitranslmed.abj5305. Epub 2022 Jan 26. PMID: 34783582.

Hauser BM, McNulty J, Zaki MM, Gupta S, Cote DJ, Bernstock JD, Lu Y, Chi JH, Groff MW, Khawaja AM, Smith TR, Zaidi HA. Predictors of thoracic and lumbar spine injuries in patients with TBI: A nationwide analysis. Injury. 2022 Mar;53(3):1087-1093. doi: 10.1016/j.injury.2021.09.060. Epub 2021 Oct 2. PMID: 34625238; PMCID: PMC8863622.

Hauser BM, Sangesland M, Lam EC, Feldman J, Balazs AB, Lingwood D, Schmidt AG. Humoral responses to the SARS-CoV-2 spike and receptor binding domain in context of pre-existing immunity confer broad sarbecovirus neutralization. Front Immunol. 2022 Aug 4;13:902260. doi: 10.3389/fimmu.2022.902260. PMID: 35990628; PMCID: PMC9386501.

Tas JMJ, Koo JH, Lin YC, Xie Z, Steichen JM, Jackson AM, Hauser BM, Wang X, Cottrell CA, Torres JL, Warner JE, Kirsch KH, Weldon SR, Groschel B, Nogal B, Ozorowski G, Bangaru S, Phelps N, Adachi Y, Eskandarzadeh S, Kubitz M, Burton DR, Lingwood D, Schmidt AG, Nair U, Ward AB, Schief WR, Batista FD. Antibodies from primary humoral responses modulate the recruitment of naive B cells during secondary responses. Immunity. 2022 Oct 11;55(10):1856-1871.e6. doi: 10.1016/j.immuni.2022.07.020. Epub 2022 Aug 4. PMID: 35987201; PMCID: PMC9350677.

Stark N, Hayirli T, Bhanja A, Kerrissey M, Hardy J, Peabody CR. Unprecedented Training: Experience of Residents During the COVID-19 Pandemic. Ann Emerg Med. 2022 May;79(5):488-494. doi: 10.1016/j.annemergmed.2022.01.022. Epub 2022 Jan 24. PMID: 35277294; PMCID: PMC8784436.

Alidina S, Sydlowski MM, Ahearn O, Andualem BG, Barash D, Bari S, Barringer E, Bekele A, Beyene AD, Burssa DG, Derbew M, Drown L, Gulilat D, Gultie TK, Hayirli TC, Meara JG, Staffa SJ, Workineh SE, Zanial N, Zeleke ZB, Mengistu AE, Ashengo TA. Implementing surgical mentorship in a resource-constrained context: a mixed methods assessment of the experiences of mentees, mentors, and leaders, and lessons learned. BMC Med Educ. 2022 Aug 31;22(1):653. doi: 10.1186/s12909-022-03691-2. PMID: 36045356; PMCID: PMC9434847.

Kerrissey MJ, Hayirli TC, Bhanja A, Stark N, Hardy J, Peabody CR. How psychological safety and feeling heard relate to burnout and adaptation amid uncertainty. Health Care Manage Rev. 2022 Oct-Dec 01;47(4):308-316. doi: 10.1097/HMR.0000000000000338. Epub 2022 Feb 17. PMID: 35135989; PMCID: PMC9422764.

Bhanja A, Hayirli T, Stark N, Hardy J, Peabody CR, Kerrissey M. Team and leadership factors and their relationship to burnout in emergency medicine during COVID-19: A 3-wave cross-sectional study. J Am Coll Emerg Physicians Open. 2022 Jun 30;3(4):e12761. doi: 10.1002/emp2.12761. PMID: 35782348; PMCID: PMC9245504.

Hayirli TC, Warinner CB. Hospital Characteristics Associated with the Availability of Interventional Radiology Facilities and Services. Radiology. 2022 Dec 6:221189. doi: 10.1148/radiol.221189. Epub ahead of print. PMID: 36472535.

Qian X, DeGennaro EM, Talukdar M, Akula SK, Lai A, Shao DD, Gonzalez D, Marciano JH, Smith RS, Hylton NK, Yang E, Bazan JF, Barrett L, Yeh RC, Hill RS, Beck SG, Otani A, Angad J, Mitani T, Posey JE, Pehlivan D, Calame D, Aydin H, Yesilbas O, Parks KC, Argilli E, England E, Im K, Taranath A, Scott HS, Barnett CP, Arts P, Sherr EH, Lupski JR, Walsh CA. Loss of non-motor kinesin KIF26A causes congenital brain malformations via dysregulated neuronal migration and axonal growth as well as apoptosis. Dev Cell. 2022 Oct 7:S1534-5807(22)00681-5. doi: 10.1016/j.devcel.2022.09.011. Epub ahead of print. PMID: 36228617.

Kong E, Shepard M, McIntyre A. Turnover in Zero-Premium Status Among Health Insurance Marketplace Plans Available to Low-Income Enrollees. JAMA Health Forum. 2022;3(4):e220674. doi:10.1001/jamahealthforum.2022.0674

Hsia K, Kong E. Characterizing the Reaction of Doctors to COVID-19 on Twitter. J Quant Descr Digit Media. 2022;2:10.51685/jqd.2022.012. doi: 10.51685/jqd.2022.012. PMID: 35542174; PMCID: PMC9082619.

Lu J, Behbahani AH, Hamburg L, Westeinde EA, Dawson PM, Lyu C, Maimon G, Dickinson MH, Druckmann S, Wilson RI. Transforming representations of movement from body- to world-centric space. Nature. 2022 Jan;601(7891):98-104. doi: 10.1038/s41586-021-04191-x. Epub 2021 Dec 15. PMID: 34912123.

Mikhael JG, Kim HR, Uchida N, Gershman SJ. The role of state uncertainty in the dynamics of dopamine. Curr Biol. 2022 Jan 28:S0960-9822(22)00036-7. doi: 10.1016/j.cub.2022.01.025. Epub ahead of print. PMID: 35114098.

Jakob AMV, Mikhael JG, Hamilos AE, Assad JA, Gershman SJ. Dopamine mediates the bidirectional update of interval timing. Behav Neurosci. 2022 Oct;136(5):445-452. doi: 10.1037/bne0000529. PMID: 36222637

Clark LE, Clark SA, Lin C, Liu J, Coscia A, Nabel KG, Yang P, Neel DV, Lee H, Brusic V, Stryapunina I, Plante KS, Ahmed AA, Catteruccia F, Young-Pearse TL, Chiu IM, Llopis PM, Weaver SC, Abraham J. VLDLR and ApoER2 are receptors for multiple alphaviruses. Nature. 2022 Feb;602(7897):475-480. doi: 10.1038/s41586-021-04326-0. Epub 2021 Dec 20. PMID: 34929721; PMCID: PMC8808280.

Nabel KG, Clark SA, Shankar S, Pan J, Clark LE, Yang P, Coscia A, McKay LGA, Varnum HH, Brusic V, Tolan NV, Zhou G, Desjardins M, Turbett SE, Kanjilal S, Sherman AC, Dighe A, LaRocque RC, Ryan ET, Tylek C, Cohen-Solal JF, Darcy AT, Tavella D, Clabbers A, Fan Y, Griffiths A, Correia IR, Seagal J, Baden LR, Charles RC, Abraham J. Structural basis for continued antibody evasion by the SARS-CoV-2 receptor binding domain. Science. 2022 Jan 21;375(6578):eabl6251. doi: 10.1126/science.abl6251. Epub 2022 Jan 21. PMID: 34855508.

Clark LE, Clark SA, Lin C, Liu J, Coscia A, Nabel KG, Yang P, Neel DV, Lee H, Brusic V, Stryapunina I, Plante KS, Ahmed AA, Catteruccia F, Young-Pearse TL, Chiu IM, Llopis PM, Weaver SC, Abraham J. VLDLR and ApoER2 are receptors for multiple alphaviruses. Nature. 2022 Feb;602(7897):475-480. doi: 10.1038/s41586-021-04326-0. Epub 2021 Dec 20. PMID: 34929721; PMCID: PMC8808280.

Yang NJ, Isensee J, Neel DV, Quadros AU, Zhang HB, Lauzadis J, Liu SM, Shiers S, Belu A, Palan S, Marlin S, Maignel J, Kennedy-Curran A, Tong VS, Moayeri M, Röderer P, Nitzsche A, Lu M, Pentelute BL, Brüstle O, Tripathi V, Foster KA, Price TJ, Collier RJ, Leppla SH, Puopolo M, Bean BP, Cunha TM, Hucho T, Chiu IM. Anthrax toxins regulate pain signaling and can deliver molecular cargoes into ANTXR2+ DRG sensory neurons. Nat Neurosci. 2022 Feb;25(2):168-179. doi: 10.1038/s41593-021-00973-8. Epub 2021 Dec 20. PMID: 34931070.

Joung J, Kirchgatterer PC, Singh A, Cho JH, Nety SP, Larson RC, Macrae RK, Deasy R, Tseng YY, Maus MV, Zhang F. CRISPR activation screen identifies BCL-2 proteins and B3GNT2 as drivers of cancer resistance to T cell-mediated cytotoxicity. Nat Commun. 2022 Mar 25;13(1):1606. doi: 10.1038/s41467-022-29205-8. PMID: 35338135

Page JE, Skiba MA, Do T, Kruse AC, Walker S. Metal cofactor stabilization by a partner protein is a widespread strategy employed for amidase activation. Proc Natl Acad Sci U S A. 2022 Jun 28;119(26):e2201141119. doi: 10.1073/pnas.2201141119. Epub 2022 Jun 22. PMID: 35733252; PMCID: PMC9245657.

Welch NL, Zhu M, Hua C, Weller J, Mirhashemi ME, Nguyen TG, Mantena S, Bauer MR, Shaw BM, Ackerman CM, Thakku SG, Tse MW, Kehe J, Uwera MM, Eversley JS, Bielwaski DA, McGrath G, Braidt J, Johnson J, Cerrato F, Moreno GK, Krasilnikova LA, Petros BA, Gionet GL, King E, Huard RC, Jalbert SK, Cleary ML, Fitzgerald NA, Gabriel SB, Gallagher GR, Smole SC, Madoff LC, Brown CM, Keller MW, Wilson MM, Kirby MK, Barnes JR, Park DJ, Siddle KJ, Happi CT, Hung DT, Springer M, MacInnis BL, Lemieux JE, Rosenberg E, Branda JA, Blainey PC, Sabeti PC, Myhrvold C. Multiplexed CRISPR-based microfluidic platform for clinical testing of respiratory viruses and identification of SARS-CoV-2 variants. Nat Med. 2022 Feb 7. doi: 10.1038/s41591-022-01734-1. Epub ahead of print. PMID: 35130561.

Petros BA, Turcinovic J, Welch NL, White LF, Kolaczyk ED, Bauer MR, Cleary M, Dobbins ST, Doucette-Stamm L, Gore M, Nair P, Nguyen TG, Rose S, Taylor BP, Tsang D, Wendlandt E, Hope M, Platt JT, Jacobson KR, Bouton T, Yune S, Auclair JR, Landaverde L, Klapperich CM, Hamer DH, Hanage WP, MacInnis BL, Sabeti PC, Connor JH, Springer M. Early introduction and rise of the Omicron SARS-CoV-2 variant in highly vaccinated university populations. Clin Infect Dis. 2022 May 25:ciac413. doi: 10.1093/cid/ciac413. Epub ahead of print. PMID: 35616119; PMCID: PMC9213864.

Phan JM, Kim S, Linh ĐTT, Cosimi LA, Pollack TM. Telehealth Interventions for HIV in Low- and Middle-Income Countries. Curr HIV/AIDS Rep. 2022 Sep 26:1–10. doi: 10.1007/s11904-022-00630-0. Epub ahead of print. PMID: 36156183; PMCID: PMC9510721.

Mintz R, Pierson L, Miller DG. Rethinking Professionalism Assessments in Medical Education. Ann Intern Med. 2022 Jul;175(7):1030-1031. doi: 10.7326/M22-0488. Epub 2022 May 31. PMID: 35635847.

Pierson L, Pierson E. Patients cannot consent to care unless they know how much it costs. BMJ. 2022 Jul 15;378:o1747. doi: 10.1136/bmj.o1747. PMID: 35840145.

Ye Z, Qian JM, Hosny A, Zeleznik R, Plana D, Likitlersuang J, Zhang Z, Mak RH, Aerts HJWL, Kann BH. Deep Learning-based Detection of Intravenous Contrast Enhancement on CT Scans. Radiol Artif Intell. 2022 May 4;4(3):e210285. doi: 10.1148/ryai.210285. PMID: 35652117; PMCID: PMC9152686.

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Fallah PN, Jayaram A, Hauser BM. Moving the Needle on Global Surgery Education in the US. J Surg Educ. 2021 Nov-Dec;78(6):1780-1782. doi: 10.1016/j.jsurg.2021.04.006. Epub 2021 May 6. PMID: 33965360.

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Hauser BM*, Hoffman SE* Gupta S, Zaki MM, Xu E, Chua M, Bernstock JD, Khawaja A, Smith TR, Proctor MR, Zaidi HA. Association of venous thromboembolism following pediatric traumatic spinal injuries with injury severity and longer hospital stays. J Neurosurg Spine. 2021 Sep 17:1-7. doi: 10.3171/2021.3.SPINE201981. Epub ahead of print. PMID: 34534962.

Driver J, Hoffman SE, Tavakol S, Woodward E, Maury EA, Bhave V, Greenwald NF, Nassiri F, Aldape K, Zadeh G, Choudhury A, Vasudevan HN, Magill ST, Raleigh DR, Abedalthagafi M, Aizer AA, Alexander BM, Ligon KL, Reardon DA, Wen PY, Al-Mefty O, Ligon AH, Dubuc AM, Beroukhim R, Claus EB, Dunn IF, Santagata S, Bi WL. A Molecularly Integrated Grade for Meningioma. Neuro Oncol. 2021 Sep 11:noab213. doi: 10.1093/neuonc/noab213. Epub ahead of print. PMID: 34508644.

Hoffman SE, Gupta S, Huang K, Klinger N, Lu Y. Three-dimensional Navigation-guided, Prone, Single-position, Lateral Lumbar Interbody Fusion Technique. J Vis Exp. 2021 Jul 15;(173). doi: 10.3791/62662. PMID: 34338679.

Bernstock JD, Hoffman SE, Chen JA, Gupta S, Kappel AD, Smith TR, Chiocca EA. The Current Landscape of Oncolytic Herpes Simplex Viruses as Novel Therapies for Brain Malignancies. Viruses. 2021 Jun 17;13(6):1158. doi: 10.3390/v13061158. PMID: 34204248; PMCID: PMC8234451.

Bi WL, Nayak L, Meredith DM, Driver J, Du Z, Hoffman S, Li Y, Lee EQ, Beroukhim R, Rinne M, McFaline-Figueroa R, Chukwueke U, McCluskey C, Gaffey S, Cherniack AD, Stefanik J, Doherty L, Taubert C, Cifrino M, LaFrankie D, Graillon T, Wen PY, Ligon KL, Al-Mefty O, Huang RY, Muzikansky A, Chiocca EA, Santagata S, Dunn IF, Reardon DA. Activity of PD-1 blockade with Nivolumab among patients with recurrent atypical/anaplastic meningioma: Phase II trial results. Neuro Oncol. 2021 May 20:noab118. doi: 10.1093/neuonc/noab118. Epub ahead of print. PMID: 34015129.

Feng R, Hoffman SE, Wagner K, Ullman JS, Stippler M, Germano IM. Women Neurosurgeons in Academic and Other Leadership Positions in the United States. World Neurosurg. 2021 Mar;147:80-88. doi: 10.1016/j.wneu.2020.12.069. Epub 2020 Dec 21. PMID: 33358734.

Hoffman SE, Al Abdulmohsen SA, Gupta S, Hauser BM, Meredith DM, Dunn IF, Bi WL. Translational Windows in Chordoma: A Target Appraisal. Front Neurol. 2020 Jul 8;11:657. doi: 10.3389/fneur.2020.00657. PMID: 32733369; PMCID: PMC7360834.

Tan KT, Kim H, Carrot-Zhang J, Zhang Y, Kim WJ, Kugener G, Wala JA, Howard TP, Chi YY, Beroukhim R, Li H, Ha G, Alper SL, Perlman EJ, Mullen EA, Hahn WC, Meyerson M, Hong AL. Haplotype-resolved germline and somatic alterations in renal medullary carcinomas. Genome Med. 2021 Jul 14;13(1):114. doi: 10.1186/s13073-021-00929-4. PMID: 34261517; PMCID: PMC8281718.

Dharia NV, Kugener G, Guenther LM, Malone CF, Durbin AD, Hong AL, Howard TP, Bandopadhayay P, Wechsler CS, Fung I, Warren AC, Dempster JM, Krill-Burger JM, Paolella BR, Moh P, Jha N, Tang A, Montgomery P, Boehm JS, Hahn WC, Roberts CWM, McFarland JM, Tsherniak A, Golub TR, Vazquez F, Stegmaier K. A first-generation pediatric cancer dependency map. Nat Genet. 2021 Apr;53(4):529-538. doi: 10.1038/s41588-021-00819-w. Epub 2021 Mar 22. PMID: 33753930; PMCID: PMC8049517.

Udomlumleart T, Hu S, Garg S. Lineages of embryonic stem cells show non-Markovian state transitions. iScience. 2021 Jul 17;24(8):102879. doi: 10.1016/j.isci.2021.102879. PMID: 34401663; PMCID: PMC8353490.

Doddahonnaiah D, Lenehan PJ, Hughes TK, Zemmour D, Garcia-Rivera E, Venkatakrishnan AJ, Chilaka R, Khare A, Kasaraneni A, Garg A, Anand A, Barve R, Thiagarajan V, Soundararajan V. A Literature-Derived Knowledge Graph Augments the Interpretation of Single Cell RNA-seq Datasets. Genes (Basel). 2021 Jun 10;12(6):898. doi: 10.3390/genes12060898. PMID: 34200671; PMCID: PMC8229796.

Ma F, Hughes TK, Teles RMB, Andrade PR, de Andrade Silva BJ, Plazyo O, Tsoi LC, Do T, Wadsworth MH 2nd, Oulee A, Ochoa MT, Sarno EN, Iruela-Arispe ML, Klechevsky E, Bryson B, Shalek AK, Bloom BR, Gudjonsson JE, Pellegrini M, Modlin RL. The cellular architecture of the antimicrobial response network in human leprosy granulomas. Nat Immunol. 2021 Jul;22(7):839-850. doi: 10.1038/s41590-021-00956-8. Epub 2021 Jun 24. PMID: 34168371.

Dwyer DF, Ordovas-Montanes J, Allon SJ, Buchheit KM, Vukovic M, Derakhshan T, Feng C, Lai J, Hughes TK, Nyquist SK, Giannetti MP, Berger B, Bhattacharyya N, Roditi RE, Katz HR, Nawijn MC, Berg M, van den Berge M, Laidlaw TM, Shalek AK, Barrett NA, Boyce JA. Human airway mast cells proliferate and acquire distinct inflammation-driven phenotypes during type 2 inflammation. Sci Immunol. 2021 Feb 26;6(56):eabb7221. doi: 10.1126/sciimmunol.abb7221. PMID: 33637594; PMCID: PMC8362933

Corchado-Garcia J, Zemmour D, Hughes T, Bandi H, Cristea-Platon T, Lenehan P, Pawlowski C, Bade S, O'Horo JC, Gores GJ, Williams AW, Badley AD, Halamka J, Virk A, Swift MD, Wagner T, Soundararajan V. Analysis of the Effectiveness of the Ad26.COV2.S Adenoviral Vector Vaccine for Preventing COVID-19. JAMA Netw Open. 2021 Nov 1;4(11):e2132540. doi: 10.1001/jamanetworkopen.2021.32540. PMID: 34726743; PMCID: PMC8564583.

Venkatakrishnan AJ, Pawlowski C, Zemmour D, Hughes T, Anand A, Berner G, Kayal N, Puranik A, Conrad I, Bade S, Barve R, Sinha P, O'Horo JC, Badley AD, Halamka J, Soundararajan V. Mapping each pre-existing condition's association to short-term and long-term COVID-19 complications. NPJ Digit Med. 2021 Jul 27;4(1):117. doi: 10.1038/s41746-021-00484-7. PMID: 34315980; PMCID: PMC8316410.

Lopez L, Nguyen T, Weber G, Kleimola K, Bereda M, Liu Y, Accorsi EK, Skates SJ, Santa Maria JP Jr, Smith KR, Kalinich M. Seroprevalence of anti-SARS-CoV-2 IgG antibodies in the staff of a public school system in the midwestern United States. PLoS One. 2021 Jun 10;16(6):e0243676. doi: 10.1371/journal.pone.0243676. PMID: 34111144; PMCID: PMC8191884.

Lopez L, Nguyen T, Weber G, Kleimola K, Bereda M, Liu Y, Accorsi EK, Skates SJ, Santa Maria JP Jr, Smith KR, Kalinich M. Seroprevalence of anti-SARS-CoV-2 IgG antibodies in the staff of a public school system in the midwestern United States. PLoS One. 2021 Jun 10;16(6):e0243676. doi: 10.1371/journal.pone.0243676. PMID: 34111144; PMCID: PMC8191884.

Smati H, Cohen PA, Nagda DV, Saravanan Y, Kalugin PN, Li CY, Ranker LR. Risk Factors for Hospitalization Among Patients with COVID-19 at a Community Ambulatory Clinic in Massachusetts During the Initial Pandemic Surge. J Immigr Minor Health. 2021 Oct;23(5):1110-1115. doi: 10.1007/s10903-021-01189-5. Epub 2021 Mar 26. PMID: 33772419; PMCID: PMC7996715.

Wang JS, Kamath T, Mazur CM, Mirzamohammadi F, Rotter D, Hojo H, Castro CD, Tokavanich N, Patel R, Govea N, Enishi T, Wu Y, da Silva Martins J, Bruce M, Brooks DJ, Bouxsein ML, Tokarz D, Lin CP, Abdul A, Macosko EZ, Fiscaletti M, Munns CF, Ryder P, Kost-Alimova M, Byrne P, Cimini B, Fujiwara M, Kronenberg HM, Wein MN. Control of osteocyte dendrite formation by Sp7 and its target gene osteocrin. Nat Commun. 2021 Nov 1;12(1):6271. doi: 10.1038/s41467-021-26571-7. PMID: 34725346; PMCID: PMC8560803.

Kang JB, Nathan A, Weinand K, Zhang F, Millard N, Rumker L, Moody DB, Korsunsky I, Raychaudhuri S. Efficient and precise single-cell reference atlas mapping with Symphony. Nat Commun. 2021 Oct 7;12(1):5890. doi: 10.1038/s41467-021-25957-x. PMID: 34620862.

Reshef YA, Rumker L, Kang JB, Nathan A, Korsunsky I, Asgari S, Murray MB, Moody DB, Raychaudhuri S. Co-varying neighborhood analysis identifies cell populations associated with phenotypes of interest from single-cell transcriptomics. Nat Biotechnol. 2021 Oct 21. doi: 10.1038/s41587-021-01066-4. Epub ahead of print. PMID: 34675423.

Millard N, Korsunsky I, Weinand K, Fonseka CY, Nathan A, Kang JB, Raychaudhuri S. Maximizing statistical power to detect differentially abundant cell states with scPOST. Cell Rep Methods. 2021 Nov 16;1(8):100120. doi: 10.1016/j.crmeth.2021.100120. Epub 2021 Nov 22. PMID: 35005693; PMCID: PMC8740883

Burger ML, Cruz AM, Crossland GE, Gaglia G, Ritch CC, Blatt SE, Bhutkar A, Canner D, Kienka T, Tavana SZ, Barandiaran AL, Garmilla A, Schenkel JM, Hillman M, de Los Rios Kobara I, Li A, Jaeger AM, Hwang WL, Westcott PMK, Manos MP, Holovatska MM, Hodi FS, Regev A, Santagata S, Jacks T. Antigen dominance hierarchies shape TCF1+ progenitor CD8 T cell phenotypes in tumors. Cell. 2021 Sep 16;184(19):4996-5014.e26. doi: 10.1016/j.cell.2021.08.020. PMID: 34534464; PMCID: PMC8522630.

Zhang Y, Guo R, Kim SH, Shah H, Zhang S, Liang JH, Fang Y, Gentili M, Leary CNO, Elledge SJ, Hung DT, Mootha VK, Gewurz BE. SARS-CoV-2 hijacks folate and one-carbon metabolism for viral replication. Nat Commun. 2021 Mar 15;12(1):1676. doi: 10.1038/s41467-021-21903-z. PMID: 33723254; PMCID: PMC7960988.

Rath S, Sharma R, Gupta R, Ast T, Chan C, Durham TJ, Goodman RP, Grabarek Z, Haas ME, Hung WHW, Joshi PR, Jourdain AA, Kim SH, Kotrys AV, Lam SS, McCoy JG, Meisel JD, Miranda M, Panda A, Patgiri A, Rogers R, Sadre S, Shah H, Skinner OS, To TL, Walker MA, Wang H, Ward PS, Wengrod J, Yuan CC, Calvo SE, Mootha VK. MitoCarta3.0: an updated mitochondrial proteome now with sub-organelle localization and pathway annotations. Nucleic Acids Res. 2021 Jan 8;49(D1):D1541-D1547. doi: 10.1093/nar/gkaa1011. PMID: 33174596; PMCID: PMC7778944.

Tothova Z, Valton AL, Gorelov RA, Vallurupalli M, Krill-Burger JM, Holmes A, Landers CC, Haydu JE, Malolepsza E, Hartigan C, Donahue M, Popova KD, Koochaki S, Venev SV, Rivera J, Chen E, Lage K, Schenone M, D'Andrea AD, Carr SA, Morgan EA, Dekker J, Ebert BL. Cohesin mutations alter DNA damage repair and chromatin structure and create therapeutic vulnerabilities in MDS/AML. JCI Insight. 2021 Feb 8;6(3):e142149. doi: 10.1172/jci.insight.142149. PMID: 33351783; PMCID: PMC7934867.

Belizaire R*, Koochaki SHJ*, Udeshi ND, Vedder A, Sun L, Svinkina T, Hartigan C, McConkey M, Kovalcik V, Bizuayehu A, Stanclift C, Schenone M, Carr SA, Padron E, Ebert BL. CBL mutations drive PI3K/AKT signaling via increased interaction with LYN and PIK3R1. Blood. 2021 Apr 22;137(16):2209-2220. doi: 10.1182/blood.2020006528. PMID: 33512474; PMCID: PMC8063090.

Botti-Lodovico Y, Nair P, Nosamiefan D, Stremlau M, Schaffner S, Agignoae SV, Aiyepada JO, Ajogbasile FV, Akpede GO, Alhasan F, Andersen KG, Asogun DA, Ayodeji OO, Badiane AS, Barnes K, Bauer MR, Bell-Kareem A, Benard ME, Benevolence EO, Blessing O, Boehm CK, Boisen ML, Bond NG, Branco LM, Butts MJ, Carter A, Colubri A, Deme AB, DeRuff KC, Diédhiou Y, Edamhande AP, Elhamoumi S, Engel EJ, Eromon P, Fallah M, Folarin OA, Fry B, Garry R, Gaye A, Gbakie M, Gevao SM, Gionet G, Gladden-Young A, Goba A, Gomis JF, Happi AN, Houghton M, Ihekwuazu C, Iruolagbe CO, Jackson J, Jalloh S, Johnson J, Kanneh L, Kayode A, Kemball M, Kingsley OC, Koroma V, Kotliar D, Mehta S, Metsky HC, Michael A, Mirhashemi ME, Modjarrad K, Momoh M, Myhrvold CA, Naregose OG, Ndiaye T, Ndiaye M, Ndiaye A, Normandin E, Odia I, Oguzie JU, Okogbenin SA, Okokhere PO, Okolie J, Olawoye IB, Olumade TJ, Oluniyi PE, Omoregie O, Park DJ, Paye MF, Petros B, Philippakis AA, Priscilla A, Ricks A, Rimoin A, Sandi JD, Schieffelin JS, Schreiber M, Seck MC, Siddiqui S, Siddle K, Smither AR, Sy M, Sy N, Tomkins-Tinch CH, Tomori O, Ugwu C, Uwanibe JN, Uyigue EA, Victoria DI, Vinzé A, Vodzak ME, Welch N, Wurie HI, Zoumarou D, Grant DS, Ndiaye D, MacInnis B, Sabeti PC, Happi C. The Origins and Future of Sentinel: An Early-Warning System for Pandemic Preemption and Response. Viruses. 2021 Aug 13;13(8):1605. doi: 10.3390/v13081605. PMID: 34452470; PMCID: PMC8402630.

Kotliar D, Colubri A. Sciviewer enables interactive visual interrogation of single-cell RNA-Seq data from the python programming environment. Bioinformatics. 2021 Oct 2:btab689. doi: 10.1093/bioinformatics/btab689. Epub ahead of print. PMID: 34601589

Tan CL*, Kuchroo JR*, Sage PT, Liang D, Francisco LM, Buck J, Thaker YR, Zhang Q, McArdel SL, Juneja VR, Lee SJ, Lovitch SB, Lian C, Murphy GF, Blazar BR, Vignali DAA, Freeman GJ, Sharpe AH. PD-1 restraint of regulatory T cell suppressive activity is critical for immune tolerance. J Exp Med. 2021 Jan 4;218(1):e20182232. doi: 10.1084/jem.20182232. PMID: 33045061; PMCID: PMC7543091.

Kuchroo JR, Hafler DA, Sharpe AH, Lucca LE. The double-edged sword: Harnessing PD-1 blockade in tumor and autoimmunity. Sci Immunol. 2021 Nov 5;6(65):eabf4034. doi: 10.1126/sciimmunol.abf4034. Epub 2021 Nov 5. PMID: 34739340.

Thompson LL, Krasnow NA, Chang MS, Yoon J, Li EB, Polyakov NJ, Molina GE, Said JT, Huang K, Kuchroo JR, Hinton AN, Reynolds KL, Chen ST. Patterns of Cutaneous and Noncutaneous Immune-Related Adverse Events Among Patients With Advanced Cancer. JAMA Dermatol. 2021 May 1;157(5):577-582. doi: 10.1001/jamadermatol.2021.0326. PMID: 33760001; PMCID: PMC7992016.

Thompson LL, Chang MS, Polyakov NJ, Blum AE, Josephs N, Krasnow NA, Yoon J, Li EB, Molina GE, Said JT, Huang K, Kuchroo JR, Hinton AN, Chen ST. Prognostic significance of cutaneous immune-related adverse events in patients with melanoma and other cancers on immune checkpoint inhibitors. J Am Acad Dermatol. 2021 Mar 17:S0190-9622(21)00563-6. doi: 10.1016/j.jaad.2021.03.024. Epub ahead of print. PMID: 33722547.

Pauken KE, Shahid O, Lagattuta KA, Mahuron KM, Luber JM, Lowe MM, Huang L, Delaney C, Long JM, Fung ME, Newcomer K, Tsai KK, Chow M, Guinn S, Kuchroo JR, Burke KP, Schenkel JM, Rosenblum MD, Daud AI, Sharpe AH, Singer M. Single-cell analyses identify circulating anti-tumor CD8 T cells and markers for their enrichment. J Exp Med. 2021 Apr 5;218(4):e20200920. doi: 10.1084/jem.20200920. PMID: 33651880; PMCID: PMC7933992.

Ryu S, Martino N, Kwok SJJ, Bernstein L, Yun SH. Label-free histological imaging of tissues using Brillouin light scattering contrast. Biomed Opt Express. 2021 Feb 17;12(3):1437-1448. doi: 10.1364/BOE.414474. PMID: 33796364; PMCID: PMC7984781.

Lagattuta KA, Nigrovic PA. Estrogen-Driven Changes in Immunoglobulin G Fc Glycosylation. Exp Suppl. 2021;112:341-361. doi: 10.1007/978-3-030-76912-3_11. PMID: 34687016.

Pauken KE, Shahid O, Lagattuta KA, Mahuron KM, Luber JM, Lowe MM, Huang L, Delaney C, Long JM, Fung ME, Newcomer K, Tsai KK, Chow M, Guinn S, Kuchroo JR, Burke KP, Schenkel JM, Rosenblum MD, Daud AI, Sharpe AH, Singer M. Single-cell analyses identify circulating anti-tumor CD8 T cells and markers for their enrichment. J Exp Med. 2021 Apr 5;218(4):e20200920. doi: 10.1084/jem.20200920. PMID: 33651880; PMCID: PMC7933992.

Harris HK, Nakayama T, Lai J, Zhao B, Argyrou N, Gubbels CS, Soucy A, Genetti CA, Suslovitch V, Rodan LH, Tiller GE, Lesca G, Gripp KW, Asadollahi R, Hamosh A, Applegate CD, Turnpenny PD, Simon MEH, Volker-Touw CML, Gassen KLIV, Binsbergen EV, Pfundt R, Gardeitchik T, Vries BBA, Immken LL, Buchanan C, Willing M, Toler TL, Fassi E, Baker L, Vansenne F, Wang X, Ambrus JL Jr, Fannemel M, Posey JE, Agolini E, Novelli A, Rauch A, Boonsawat P, Fagerberg CR, Larsen MJ, Kibaek M, Labalme A, Poisson A, Payne KK, Walsh LE, Aldinger KA, Balciuniene J, Skraban C, Gray C, Murrell J, Bupp CP, Pascolini G, Grammatico P, Broly M, Küry S, Nizon M, Rasool IG, Zahoor MY, Kraus C, Reis A, Iqbal M, Uguen K, Audebert-Bellanger S, Ferec C, Redon S, Baker J, Wu Y, Zampino G, Syrbe S, Brosse I, Jamra RA, Dobyns WB, Cohen LL, Blomhoff A, Mignot C, Keren B, Courtin T, Agrawal PB, Beggs AH, Yu TW. Disruption of RFX family transcription factors causes autism, attention-deficit/hyperactivity disorder, intellectual disability, and dysregulated behavior. Genet Med. 2021 Jun;23(6):1028-1040. doi: 10.1038/s41436-021-01114-z. Epub 2021 Mar 3. PMID: 33658631.

Lee SJ, Lodder B, Chen Y, Patriarchi T, Tian L, Sabatini BL. Cell-type-specific asynchronous modulation of PKA by dopamine in learning. Nature. 2021 Feb;590(7846):451-456. doi: 10.1038/s41586-020-03050-5. Epub 2020 Dec 23. PMID: 33361810; PMCID: PMC7889726.

Lenehan PJ, Cirella A, Uchida AM, Crowley SJ, Sharova T, Boland G, Dougan M, Dougan SK, Heckler M. Type 2 immunity is maintained during cancer-associated adipose tissue wasting. Immunother Adv. 2021 Jun 2;1(1):ltab011. doi: 10.1093/immadv/ltab011. PMID: 34291232; PMCID: PMC8286632.

Uchida AM, Lenehan PJ, Vimalathas P, Miller KC, Valencia-Yang M, Qiang L, Canha LA, Ali LR, Dougan M, Garber JJ, Dougan SK. Tissue eosinophils express the IL-33 receptor ST2 and type 2 cytokines in patients with eosinophilic esophagitis. Allergy. 2021 Oct 6. doi: 10.1111/all.15127. Epub ahead of print. PMID: 34614218.

Heckler M, Ali LR, Clancy-Thompson E, Qiang L, Ventre KS, Lenehan P, Roehle K, Luoma A, Boelaars K, Peters V, McCreary J, Boschert T, Wang ES, Suo S, Marangoni F, Mempel TR, Long HW, Wucherpfennig KW, Dougan M, Gray NS, Yuan GC, Goel S, Tolaney SM, Dougan SK. Inhibition of CDK4/6 Promotes CD8 T-cell Memory Formation. Cancer Discov. 2021 Oct;11(10):2564-2581. doi: 10.1158/2159-8290.CD-20-1540. Epub 2021 May 3. PubMed PMID: 33941591; PubMed Central PMCID: PMC8487897.

Roehle K, Qiang L, Ventre KS, Heid D, Ali LR, Lenehan P, Heckler M, Crowley SJ, Stump CT, Ro G, Godicelj A, Bhuiyan AM, Yang A, Quiles Del Rey M, Biary T, Luoma AM, Bruck PT, Tegethoff JF, Nopper SL, Li J, Byrne KT, Pelletier M, Wucherpfennig KW, Stanger BZ, Akin JJ, Mancias JD, Agudo J, Dougan M, Dougan SK. cIAP1/2 antagonism eliminates MHC class I-negative tumors through T cell-dependent reprogramming of mononuclear phagocytes. Sci Transl Med. 2021 May 19;13(594):eabf5058. doi: 10.1126/scitranslmed.abf5058. PMID: 34011631; PMCID: PMC8406785

Liu R, Paz M, Siraj L, Boyd T, Salamone S, Lite TV, Leung KM, Chirinos JD, Shang HH, Townsend MJ, Rho J, Ni P, Ranganath K, Violante AD, Zhao Z, Silvernale C, Ahmad I, Krasnow NA, Barnett ES, Harisinghani M, Kuo B, Black KE, Staller K. Feeding intolerance in critically ill patients with COVID-19. Clin Nutr. 2021 Mar 29:S0261-5614(21)00180-1. doi: 10.1016/j.clnu.2021.03.033. Epub ahead of print. PMID: 33934924; PMCID: PMC8007186

Alhazmi N, Carroll SH, Kawasaki K, Woronowicz KC, Hallett SA, Macias Trevino C, Li EB, Baron R, Gori F, Yelick PC, Harris MP, Liao EC. Synergistic roles of Wnt modulators R-spondin2 and R-spondin3 in craniofacial morphogenesis and dental development. Sci Rep. 2021 Mar 12;11(1):5871. doi: 10.1038/s41598-021-85415-y. PMID: 33712657; PMCID: PMC7954795.

Avagyan S, Weber MC, Ma S, Prasad M, Mannherz WP, Yang S, Buenrostro JD, Zon LI. Single-cell ATAC-seq reveals GATA2-dependent priming defect in myeloid and a maturation bottleneck in lymphoid lineages. Blood Adv. 2021 Jul 13;5(13):2673-2686. doi: 10.1182/bloodadvances.2020002992. PMID: 34170284; PMCID: PMC8221101.

Driver J, Hoffman SE, Tavakol S, Woodward E, Maury EA, Bhave V, Greenwald NF, Nassiri F, Aldape K, Zadeh G, Choudhury A, Vasudevan HN, Magill ST, Raleigh DR, Abedalthagafi M, Aizer AA, Alexander BM, Ligon KL, Reardon DA, Wen PY, Al-Mefty O, Ligon AH, Dubuc AM, Beroukhim R, Claus EB, Dunn IF, Santagata S, Bi WL. A Molecularly Integrated Grade for Meningioma. Neuro Oncol. 2021 Sep 11:noab213. doi: 10.1093/neuonc/noab213. Epub ahead of print. PMID: 34508644.

Ganz J*, Maury EA*, Becerra B, Bizzotto S, Doan RN, Kenny CJ, Shin T, Kim J, Zhou Z, Ligon KL, Lee EA, Walsh CA. Rates and patterns of clonal oncogenic mutations in the normal human brain. Cancer Discov. 2021 Aug 13:candisc.0245.2021. doi: 10.1158/2159-8290.CD-21-0245. Epub ahead of print. PMID: 34389641.

Maury EA, Walsh CA. Somatic copy number variants in neuropsychiatric disorders. Curr Opin Genet Dev. 2021 Jun;68:9-17. doi: 10.1016/j.gde.2020.12.013. Epub 2021 Jan 11. PMID: 33444936; PMCID: PMC8205940.

Huang X, Park KM, Gontarz P, Zhang B, Pan J, McKenzie Z, Fischer LA, Dong C, Dietmann S, Xing X, Shliaha PV, Yang J, Li D, Ding J, Lungjangwa T, Mitalipova M, Khan SA, Imsoonthornruksa S, Jensen N, Wang T, Kadoch C, Jaenisch R, Wang J, Theunissen TW. OCT4 cooperates with distinct ATP-dependent chromatin remodelers in naïve and primed pluripotent states in human. Nat Commun. 2021 Aug 26;12(1):5123. doi: 10.1038/s41467-021-25107-3. PMID: 34446700; PMCID: PMC8390644.

Seo BR, Payne CJ, McNamara SL, Freedman BR, Kwee BJ, Nam S, de Lázaro I, Darnell M, Alvarez JT, Dellacherie MO, Vandenburgh HH, Walsh CJ, Mooney DJ. Skeletal muscle regeneration with robotic actuation-mediated clearance of neutrophils. Sci Transl Med. 2021 Oct 6;13(614):eabe8868. doi: 10.1126/scitranslmed.abe8868. Epub 2021 Oct 6. PMID: 34613813.

Messinger CJ, Hernández-Díaz S, McElrath T. Further Observations on Pregnancy Complications and COVID-19 Infection. JAMA Pediatr. 2021 Nov 1;175(11):1184-1185. doi: 10.1001/jamapediatrics.2021.2609. PMID: 34398227.

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Zhang ZZ, Zhang Y, He T, Sweeney CL, Baris S, Karakoc-Aydiner E, Yao Y, Ertem D, Matthews HF, Gonzaga-Jauregui C, Malech HL, Su HC, Ozen A, Smith KGC, Lenardo MJ. Homozygous IL37 mutation associated with infantile inflammatory bowel disease. Proc Natl Acad Sci U S A. 2021 Mar 9;118(10):e2009217118. doi: 10.1073/pnas.2009217118. PMID: 33674380. PMCID: PMC7958356.

Zhang Z, Ortega D, Rush A, Blankenship LR, Cheng ZJ, Moore RE, Tran MLN, Sandoval LG, Aboulhosn K, Watanabe S, Cortez KS, Perlman DH, Semmelhack MF, Miller Conrad LC. Antibiotic Adjuvant Activity Revealed in a Photoaffinity Approach to Determine the Molecular Target of Antipyocyanin Compounds. ACS Infect Dis. 2021 Feb 15. doi: 10.1021/acsinfecdis.0c00160. Epub ahead of print. PMID: 33587590.

Ziegler CGK, Miao VN, Owings AH, Navia AW, Tang Y, Bromley JD, Lotfy P, Sloan M, Laird H, Williams HB, George M, Drake RS, Christian T, Parker A, Sindel CB, Burger MW, Pride Y, Hasan M, Abraham GE 3rd, Senitko M, Robinson TO, Shalek AK, Glover SC, Horwitz BH, Ordovas-Montanes J. Impaired local intrinsic immunity to SARS-CoV-2 infection in severe COVID-19. Cell. 2021 Jul 23:S0092-8674(21)00882-5. doi: 10.1016/j.cell.2021.07.023. Epub ahead of print. PMID: 34352228; PMCID: PMC8299217.

Huang S, Ziegler CGK, Austin J, Mannoun N, Vukovic M, Ordovas-Montanes J, Shalek AK, von Andrian UH. Lymph nodes are innervated by a unique population of sensory neurons with immunomodulatory potential. Cell. 2021 Jan 21;184(2):441-459.e25. doi: 10.1016/j.cell.2020.11.028. Epub 2020 Dec 16. PMID: 33333021.

Genshaft AS*, Ziegler CGK,* Tzouanas CN, Mead BE, Jaeger AM, Navia AW, King RP, Mana MD, Huang S, Mitsialis V, Snapper SB, Yilmaz ÖH, Jacks T, Van Humbeck JF, Shalek AK. Live cell tagging tracking and isolation for spatial transcriptomics using photoactivatable cell dyes. Nat Commun. 2021 Aug 17;12(1):4995. doi: 10.1038/s41467-021-25279-y. Erratum in: Nat Commun. 2021 Sep 3;12(1):5361. PMID: 34404785; PMCID: PMC8371137. *Co-first authors

Zhang AQ. Saying yes to help. Science. 2021 Jan 1;371(6524):98. doi: 10.1126/science.371.6524.98. PMID: 33384379.

Delorey TM*, Ziegler CGK*, Heimberg G*, Normand R, Yang Y*, Segerstolpe Å, Abbondanza D*, Fleming SJ*, Subramanian *A, Montoro DT*, Jagadeesh KA*, Dey KK*, Sen P*, Slyper M*, Pita-Juárez YH*, Phillips D*, Biermann J*, Bloom-Ackermann Z, Barkas N, Ganna A, Gomez J, Melms JC, Katsyv I, Normandin E, Naderi P, Popov YV, Raju SS, Niezen S, Tsai LT, Siddle KJ, Sud M, Tran VM, Vellarikkal SK, Wang Y, Amir-Zilberstein L, Atri DS, Beechem J, Brook OR, Chen J, Divakar P, Dorceus P, Engreitz JM, Essene A, Fitzgerald DM, Fropf R, Gazal S, Gould J, Grzyb J, Harvey T, Hecht J, Hether T, Jané-Valbuena J, Leney-Greene M, Ma H, McCabe C, McLoughlin DE, Miller EM, Muus C, Niemi M, Padera R, Pan L, Pant D, Pe'er C, Pfiffner-Borges J, Pinto CJ, Plaisted J, Reeves J, Ross M, Rudy M, Rueckert EH, Siciliano M, Sturm A, Todres E, Waghray A, Warren S, Zhang S, Zollinger DR, Cosimi L, Gupta RM, Hacohen N, Hibshoosh H, Hide W, Price AL, Rajagopal J, Tata PR, Riedel S, Szabo G, Tickle TL, Ellinor PT, Hung D, Sabeti PC, Novak R, Rogers R, Ingber DE, Jiang ZG, Juric D, Babadi M, Farhi SL, Izar B, Stone JR, Vlachos IS, Solomon IH, Ashenberg O, Porter CBM, Li B, Shalek AK, Villani AC, Rozenblatt-Rosen O, Regev A. COVID-19 tissue atlases reveal SARS-CoV-2 pathology and cellular targets. Nature. 2021 Jul;595(7865):107-113. doi: 10.1038/s41586-021-03570-8. Epub 2021 Apr 29. PMID: 33915569; PMCID: PMC8919505. (*equal contribution)

Muus C, Luecken MD, Eraslan G, Sikkema L, Waghray A, Heimberg G, Kobayashi Y, Vaishnav ED, Subramanian A, Smillie C, Jagadeesh KA, Duong ET, Fiskin E, Torlai Triglia E, Ansari M, Cai P, Lin B, Buchanan J, Chen S, Shu J, Haber AL, Chung H, Montoro DT, Adams T, Aliee H, Allon SJ, Andrusivova Z, Angelidis I, Ashenberg O, Bassler K, Bécavin C, Benhar I, Bergenstråhle J, Bergenstråhle L, Bolt L, Braun E, Bui LT, Callori S, Chaffin M, Chichelnitskiy E, Chiou J, Conlon TM, Cuoco MS, Cuomo ASE, Deprez M, Duclos G, Fine D, Fischer DS, Ghazanfar S, Gillich A, Giotti B, Gould J, Guo M, Gutierrez AJ, Habermann AC, Harvey T, He P, Hou X, Hu L, Hu Y, Jaiswal A, Ji L, Jiang P, Kapellos TS, Kuo CS, Larsson L, Leney-Greene MA, Lim K, Litviňuková M, Ludwig LS, Lukassen S, Luo W, Maatz H, Madissoon E, Mamanova L, Manakongtreecheep K, Leroy S, Mayr CH, Mbano IM, McAdams AM, Nabhan AN, Nyquist SK, Penland L, Poirion OB, Poli S, Qi C, Queen R, Reichart D, Rosas I, Schupp JC, Shea CV, Shi X, Sinha R, Sit RV, Slowikowski K, Slyper M, Smith NP, Sountoulidis A, Strunz M, Sullivan TB, Sun D, Talavera-López C, Tan P, Tantivit J, Travaglini KJ, Tucker NR, Vernon KA, Wadsworth MH, Waldman J, Wang X, Xu K, Yan W, Zhao W, Ziegler CGK; NHLBI LungMap Consortium; Human Cell Atlas Lung Biological Network. Single-cell meta-analysis of SARS-CoV-2 entry genes across tissues and demographics. Nat Med. 2021 Mar;27(3):546-559. doi: 10.1038/s41591-020-01227-z. Epub 2021 Mar 2. PMID: 33654293.

Rodel HE, Ferreira IATM, Ziegler CGK, Ganga Y, Bernstein M, Hwa SH, Nargan K, Lustig G, Kaplan G, Noursadeghi M, Shalek AK, Steyn AJC, Sigal A. Aggregated Mycobacterium tuberculosis Enhances the Inflammatory Response. Front Microbiol. 2021 Dec 2;12:757134. doi: 10.3389/fmicb.2021.757134. PMID: 34925266; PMCID: PMC8674758.

Bein A, Kim S, Goyal G, Cao W, Fadel C, Naziripour A, Sharma S, Swenor B, LoGrande N, Nurani A, Miao VN, Navia AW, Ziegler CGK, Montañes JO, Prabhala P, Kim MS, Prantil-Baun R, Rodas M, Jiang A, O'Sullivan L, Tillya G, Shalek AK, Ingber DE. Enteric Coronavirus Infection and Treatment Modeled With an Immunocompetent Human Intestine-On-A-Chip. Front Pharmacol. 2021 Oct 25;12:718484. doi: 10.3389/fphar.2021.718484. PMID: 34759819; PMCID: PMC8573067.

Bagati A, Kumar S, Jiang P, Pyrdol J, Zou AE, Godicelj A, Mathewson ND, Cartwright ANR, Cejas P, Brown M, Giobbie-Hurder A, Dillon D, Agudo J, Mittendorf EA, Liu XS, Wucherpfennig KW. Integrin αvβ6-TGFβ-SOX4 Pathway Drives Immune Evasion in Triple-Negative Breast Cancer. Cancer Cell. 2021 Jan 11;39(1):54-67.e9. doi: 10.1016/j.ccell.2020.12.001. Epub 2020 Dec 31. PMID: 33385331; PMCID: PMC7855651.

Siwicki M, Gort-Freitas NA, Messemaker M, Bill R, Gungabeesoon J, Engblom C, Zilionis R, Garris C, Gerhard GM, Kohl A, Lin Y, Zou AE, Cianciaruso C, Bolli E, Pfirschke C, Lin YJ, Piot C, Mindur JE, Talele N, Kohler RH, Iwamoto Y, Mino-Kenudson M, Pai SI, deVito C, Koessler T, Merkler D, Coukos A, Wicky A, Fraga M, Sempoux C, Jain RK, Dietrich PY, Michielin O, Weissleder R, Klein AM, Pittet MJ. Resident Kupffer cells and neutrophils drive liver toxicity in cancer immunotherapy. Sci Immunol. 2021 Jul 2;6(61):eabi7083. doi: 10.1126/sciimmunol.abi7083. PMID: 34215680; PMCID: PMC8845079.

2020

Morton SU, Agarwal R, Madden JA, Genetti CA, Brownstein CA, López-Giráldez F, Choi J, Seidman CE, Seidman JG, Lyon GJ, Agrawal PB. Congenital Heart Defects Due to TAF1 Missense Variants. Circ Genom Precis Med. 2020 Jun;13(3):e002843. doi: 10.1161/CIRCGEN.119.002843. Epub 2020 May 12. PMID: 32396742; PMCID: PMC7329268

Herkert JC, Verhagen JMA, Yotti R, Haghighi A, Phelan DG, James PA, Brown NJ, Stutterd C, Macciocca I, Leong K, Bulthuis MLC, van Bever Y, van Slegtenhorst MA, Boven LG, Roberts AE, Agarwal R, Seidman J, Lakdawala NK, Fernández-Avilés F, Burke MA, Pierpont ME, Braunlin E, ḈaÄŸlayan AO, Barge-Schaapveld DQCM, Birnie E, van Osch-Gevers L, van Langen IM, Jongbloed JDH, Lockhart PJ, Amor DJ, Seidman CE, van de Laar IMBH. Expanding the clinical and genetic spectrum of ALPK3 variants: Phenotypes identified in pediatric cardiomyopathy patients and adults with heterozygous variants. Am Heart J. 2020 Jul;225:108-119. doi: 10.1016/j.ahj.2020.03.023. Epub 2020 Apr 21. PMID: 32480058.

Toepfer CN, Garfinkel AC, Venturini G, Wakimoto H, Repetti G, Alamo L, Sharma A, Agarwal R, Ewoldt JF, Cloonan P, Letendre J, Lun M, Olivotto I, Colan S, Ashley E, Jacoby D, Michels M, Redwood CS, Watkins HC, Day SM, Staples JF, Padrón R, Chopra A, Ho CY, Chen CS, Pereira AC, Seidman JG, Seidman CE. Myosin Sequestration Regulates Sarcomere Function, Cardiomyocyte Energetics, and Metabolism, Informing the Pathogenesis of Hypertrophic Cardiomyopathy. Circulation. 2020 Mar 10;141(10):828-842. doi: 10.1161/CIRCULATIONAHA.119.042339. Epub 2020 Jan 27. Erratum in: Circulation. 2020 Mar 10;141(10):e645. PMID: 31983222; PMCID: PMC7077965

Sharma A, Wasson LK, Willcox JA, Morton SU, Gorham JM, DeLaughter DM, Neyazi M, Schmid M, Agarwal R, Jang MY, Toepfer CN, Ward T, Kim Y, Pereira AC, DePalma SR, Tai A, Kim S, Conner D, Bernstein D, Gelb BD, Chung WK, Goldmuntz E, Porter G, Tristani-Firouzi M, Srivastava D, Seidman JG, Seidman CE; Pediatric Cardiac Genomics Consortium. GATA6 mutations in hiPSCs inform mechanisms for maldevelopment of the heart, pancreas, and diaphragm. Elife. 2020 Oct 15;9:e53278. doi: 10.7554/eLife.53278. PMID: 33054971; PMCID: PMC7593088.

Ahuja Y, Zhou D, He Z, Sun J, Castro VM, Gainer V, Murphy SN, Hong C, Cai T. sureLDA: A multidisease automated phenotyping method for the electronic health record. J Am Med Inform Assoc. 2020 Jun 17:ocaa079. doi: 10.1093/jamia/ocaa079. Epub ahead of print. PMID: 32548637.

Sonabend W A, Cai W, Ahuja Y, Ananthakrishnan A, Xia Z, Yu S, Hong C. Automated ICD coding via unsupervised knowledge integration (UNITE). Int J Med Inform. 2020 Jul;139:104135. doi: 10.1016/j.ijmedinf.2020.104135. Epub 2020 Apr 4. PMID: 32361145.

Li Y, Nair P, Lu XH, Wen Z, Wang Y, Dehaghi AAK, Miao Y, Liu W, Ordog T, Biernacka JM, Ryu E, Olson JE, Frye MA, Liu A, Guo L, Marelli A, Ahuja Y, Davila-Velderrain J, Kellis M. Inferring multimodal latent topics from electronic health records. Nat Commun. 2020 May 21;11(1):2536. doi: 10.1038/s41467-020-16378-3. PMID: 32439869; PMCID: PMC7242436.

Tedeschi SK, Cai T, He Z, Ahuja Y, Hong C, Yates KA, Dahal K, Xu C, Lyu H, Yoshida K, Solomon DH, Cai T, Liao KP. Classifying Pseudogout using Machine Learning Approaches with Electronic Health Record Data. Arthritis Care Res (Hoboken). 2020 Jan 7:10.1002/acr.24132. doi: 10.1002/acr.24132. Epub ahead of print. PMID: 31910317; PMCID: PMC7338229.

Huang AY, Li P, Rodin RE, Kim SN, Dou Y, Kenny CJ, Akula SK, Hodge RD, Bakken TE, Miller JA, Lein ES, Park PJ, Lee EA, Walsh CA. Parallel RNA and DNA analysis after deep sequencing (PRDD-seq) reveals cell type-specific lineage patterns in human brain. Proc Natl Acad Sci U S A. 2020 Jun 23;117(25):13886-13895. doi: 10.1073/pnas.2006163117. Epub 2020 Jun 10. PMID: 32522880; PMCID: PMC7322034.

Lin AE, Diehl WE, Cai Y, Finch CL, Akusobi C, Kirchdoerfer RN, Bollinger L, Schaffner SF, Brown EA, Saphire EO, Andersen KG, Kuhn JH, Luban J, Sabeti PC. Reporter Assays for Ebola Virus Nucleoprotein Oligomerization, Virion-Like Particle Budding, and Minigenome Activity Reveal the Importance of Nucleoprotein Amino Acid Position 111. Viruses. 2020 Jan 15;12(1):E105. doi: 10.3390/v12010105. PMID: 31952352.

Connor J, Madhavan S, Mokashi M, Amanuel H, Johnson NR, Pace LE, Bartz D. Health risks and outcomes that disproportionately affect women during the Covid-19 pandemic: A review. Soc Sci Med. 2020 Dec;266:113364. doi: 10.1016/j.socscimed.2020.113364. Epub 2020 Sep 13. PMID: 32950924; PMCID: PMC7487147

Greenfield DA, Schmidt HR, Skiba MA, Mandler MD, Anderson JR, Sliz P, Kruse AC. Virtual Screening for Ligand Discovery at the σ1 Receptor. ACS Med Chem Lett. 2020 Jul 27;11(8):1555-1561. doi: 10.1021/acsmedchemlett.9b00314. PMID: 32832023; PMCID: PMC7430954.

Berger AG, Chou JJ, Hammond PT. Approaches to Modulate the Chronic Wound Environment Using Localized Nucleic Acid Delivery. Adv Wound Care (New Rochelle). 2020 Jul 7. doi: 10.1089/wound.2020.1167. Epub ahead of print. PMID: 32496978.

Scott, K. W.*; Berger, A. G.*; Stuart, J. C.*; Hundert, E. M. Re-engaging students in medical school accreditation: the independent student analysis action (ISA2) approach. MedEdPublish. 2020.

Reardon R, Beyer L, Carpenter K, Irwin M, Kester K, Laird J, Moore C, Shah P, Conrad R. Medical Student Development of K-12 Educational Resources During the COVID-19 Pandemic. Acad Pediatr. 2020 Aug;20(6):763-764. doi: 10.1016/j.acap.2020.05.022. Epub 2020 Jun 2. PMID: 32502534; PMCID: PMC7266567.

Yip MCJ, Bodnar NO, Rapoport TA. Ddi1 is a ubiquitin-dependent protease. Proc Natl Acad Sci U S A. 2020 Apr 7;117(14):7776-7781. doi: 10.1073/pnas.1902298117. Epub 2020 Mar 19. PMID: 32193351; PMCID: PMC7149228.

Holmgren AJ, Botelho A, Brandt AM. A History of Prescription Drug Monitoring Programs in the United States: Political Appeal and Public Health Efficacy. Am J Public Health. 2020 Aug;110(8):1191-1197. doi: 10.2105/AJPH.2020.305696. Epub 2020 Jun 18. PMID: 32552023; PMCID: PMC7349461.

Brandt AM, Botelho A. Not a Perfect Storm - Covid-19 and the Importance of Language. N Engl J Med. 2020 Apr 16;382(16):1493-1495. doi: 10.1056/NEJMp2005032. PMID: 32294345.

Li Y, Ivica NA, Dong T, Papageorgiou DP, He Y, Brown DR, Kleyman M, Hu G, Chen WW, Sullivan LB, Del Rosario A, Hammond PT, Vander Heiden MG, Chen J. MFSD7C switches mitochondrial ATP synthesis to thermogenesis in response to heme. Nat Commun. 2020 Sep 24;11(1):4837. doi: 10.1038/s41467-020-18607-1. PMID: 32973183; PMCID: PMC7515921.

Xie G, Ivica NA, Jia B, Li Y, Dong H, Liang Y, Brown D, Rizwan R, Chen J. CAR-T cells targeting a nucleophosmin neoepitope exhibit potent specific activity in mouse models of acute myeloid leukaemia. Nat Biomed Eng. 2020 Oct 12. doi: 10.1038/s41551-020-00625-5. Epub ahead of print. PMID: 33046866.

Kost-Alimova M, Sidhom EH, Satyam A, Chamberlain BT, Dvela-Levitt M, Melanson M, Alper SL, Santos J, Gutierrez J, Subramanian A, Byrne PJ, Grinkevich E, Reyes-Bricio E, Kim C, Clark AR, Watts AJB, Thompson R, Marshall J, Pablo JL, Coraor J, Roignot J, Vernon KA, Keller K, Campbell A, Emani M, Racette M, Bazua-Valenti S, Padovano V, Weins A, McAdoo SP, Tam FWK, Ronco L, Wagner F, Tsokos GC, Shaw JL, Greka A. A High-Content Screen for Mucin-1-Reducing Compounds Identifies Fostamatinib as a Candidate for Rapid Repurposing for Acute Lung Injury. Cell Rep Med. 2020 Oct 29;1(8):100137. doi: 10.1016/j.xcrm.2020.100137. PMID: 33294858; PMCID: PMC7691435

Miller TE, Garcia Beltran WF, Bard AZ, Gogakos T, Anahtar MN, Astudillo MG, Yang D, Thierauf J, Fisch AS, Mahowald GK, Fitzpatrick MJ, Nardi V, Feldman J, Hauser BM, Caradonna TM, Marble HD, Ritterhouse LL, Turbett SE, Batten J, Georgantas NZ, Alter G, Schmidt AG, Harris JB, Gelfand JA, Poznansky MC, Bernstein BE, Louis DN, Dighe A, Charles RC, Ryan ET, Branda JA, Pierce VM, Murali MR, Iafrate AJ, Rosenberg ES, Lennerz JK. Clinical sensitivity and interpretation of PCR and serological COVID-19 diagnostics for patients presenting to the hospital. FASEB J. 2020 Aug 28. doi: 10.1096/fj.202001700RR. Epub ahead of print. PMID: 32856766; PMCID: PMC7461169.

Tostanoski LH, Wegmann F, Martinot AJ, Loos C, McMahan K, Mercado NB, Yu J, Chan CN, Bondoc S, Starke CE, Nekorchuk M, Busman-Sahay K, Piedra-Mora C, Wrijil LM, Ducat S, Custers J, Atyeo C, Fischinger S, Burke JS, Feldman J, Hauser BM, Caradonna TM, Bondzie EA, Dagotto G, Gebre MS, Jacob-Dolan C, Lin Z, Mahrokhian SH, Nampanya F, Nityanandam R, Pessaint L, Porto M, Ali V, Benetiene D, Tevi K, Andersen H, Lewis MG, Schmidt AG, Lauffenburger DA, Alter G, Estes JD, Schuitemaker H, Zahn R, Barouch DH. Ad26 vaccine protects against SARS-CoV-2 severe clinical disease in hamsters. Nat Med. 2020 Sep 3. doi: 10.1038/s41591-020-1070-6. Epub ahead of print. PMID: 32884153. PMCID: PMC7671939.

Kaneko N, Kuo HH, Boucau J, Farmer JR, Allard-Chamard H, Mahajan VS, Piechocka-Trocha A, Lefteri K, Osborn M, Bals J, Bartsch YC, Bonheur N, Caradonna TM, Chevalier J, Chowdhury F, Diefenbach TJ, Einkauf K, Fallon J, Feldman J, Finn KK, Garcia-Broncano P, Hartana CA, Hauser BM, Jiang C, Kaplonek P, Karpell M, Koscher EC, Lian X, Liu H, Liu J, Ly NL, Michell AR, Rassadkina Y, Seiger K, Sessa L, Shin S, Singh N, Sun W, Sun X, Ticheli HJ, Waring MT, Zhu AL, Alter G, Li JZ, Lingwood D, Schmidt AG, Lichterfeld M, Walker BD, Yu XG, Padera RF Jr, Pillai S; Massachusetts Consortium on Pathogen Readiness Specimen Working Group. Loss of Bcl-6-Expressing T Follicular Helper Cells and Germinal Centers in COVID-19. Cell. 2020 Aug 19:S0092-8674(20)31067-9. doi: 10.1016/j.cell.2020.08.025. Epub ahead of print. PMID: 32877699; PMCID: PMC7437499.

Atyeo C, Fischinger S, Zohar T, Slein MD, Burke J, Loos C, McCulloch DJ, Newman KL, Wolf C, Yu J, Shuey K, Feldman J, Hauser BM, Caradonna T, Schmidt AG, Suscovich TJ, Linde C, Cai Y, Barouch D, Ryan ET, Charles RC, Lauffenburger D, Chu H, Alter G. Distinct Early Serological Signatures Track with SARS-CoV-2 Survival. Immunity. 2020 Jul 30:S1074-7613(20)30327-7. doi: 10.1016/j.immuni.2020.07.020. Epub ahead of print. PMID: 32783920; PMCID: PMC7392190.

Roy V, Fischinger S, Atyeo C, Slein M, Loos C, Balazs A, Luedemann C, Astudillo MG, Yang D, Wesemann DR, Charles R, Lafrate AJ, Feldman J, Hauser B, Caradonna T, Miller TE, Murali MR, Baden L, Nilles E, Ryan E, Lauffenburger D, Beltran WG, Alter G. SARS-CoV-2-specific ELISA development. J Immunol Methods. 2020 Aug 8:112832. doi: 10.1016/j.jim.2020.112832. Epub ahead of print. PMID: 32780998; PMCID: PMC7414735.

Kaneko N, Kuo HH, Boucau J, Farmer JR, Allard-Chamard H, Mahajan VS, Piechocka-Trocha A, Lefteri K, Osborn M, Bals J, Bartsch YC, Bonheur N, Caradonna TM, Chevalier J, Chowdhury F, Diefenbach TJ, Einkauf K, Fallon J, Feldman J, Finn KK, Garcia-Broncano P, Hartana CA, Hauser BM, Jiang C, Kaplonek P, Karpell M, Koscher EC, Lian X, Liu H, Liu J, Ly NL, Michell AR, Rassadkina Y, Seiger K, Sessa L, Shin S, Singh N, Sun W, Sun X, Ticheli HJ, Waring MT, Zhu AL, Li J, Lingwood D, Schmidt AG, Lichterfeld M, Walker BD, Yu X, Padera RF, Pillai S, Group MCOPRSW. The Loss of Bcl-6 Expressing T Follicular Helper Cells and the Absence of Germinal Centers in COVID-19. SSRN [Preprint]. 2020 Jul 16:3652322. doi: 10.2139/ssrn.3652322. PMID: 32742244; PMCID: PMC7385482.

Kaneko N, Kuo HH, Boucau J, Farmer JR, Allard-Chamard H, Mahajan VS, Piechocka-Trocha A, Lefteri K, Osborn M, Bals J, Bartsch YC, Bonheur N, Caradonna TM, Chevalier J, Chowdhury F, Diefenbach TJ, Einkauf K, Fallon J, Feldman J, Finn KK, Garcia-Broncano P, Hartana CA, Hauser BM, Jiang C, Kaplonek P, Karpell M, Koscher EC, Lian X, Liu H, Liu J, Ly NL, Michell AR, Rassadkina Y, Seiger K, Sessa L, Shin S, Singh N, Sun W, Sun X, Ticheli HJ, Waring MT, Zhu AL, Alter G, Li JZ, Lingwood D, Schmidt AG, Lichterfeld M, Walker BD, Yu XG, Padera RF Jr, Pillai S; Massachusetts Consortium on Pathogen Readiness Specimen Working Group. Loss of Bcl-6-Expressing T Follicular Helper Cells and Germinal Centers in COVID-19. Cell. 2020 Oct 1;183(1):143-157.e13. doi: 10.1016/j.cell.2020.08.025. Epub 2020 Aug 19. PMID: 32877699; PMCID: PMC7437499.

Mercado NB, Zahn R, Wegmann F, Loos C, Chandrashekar A, Yu J, Liu J, Peter L, McMahan K, Tostanoski LH, He X, Martinez DR, Rutten L, Bos R, van Manen D, Vellinga J, Custers J, Langedijk JP, Kwaks T, Bakkers MJG, Zuijdgeest D, Huber SKR, Atyeo C, Fischinger S, Burke JS, Feldman J, Hauser BM, Caradonna TM, Bondzie EA, Dagotto G, Gebre MS, Hoffman E, Jacob-Dolan C, Kirilova M, Li Z, Lin Z, Mahrokhian SH, Maxfield LF, Nampanya F, Nityanandam R, Nkolola JP, Patel S, Ventura JD, Verrington K, Wan H, Pessaint L, Ry AV, Blade K, Strasbaugh A, Cabus M, Brown R, Cook A, Zouantchangadou S, Teow E, Andersen H, Lewis MG, Cai Y, Chen B, Schmidt AG, Reeves RK, Baric RS, Lauffenburger DA, Alter G, Stoffels P, Mammen M, Hoof JV, Schuitemaker H, Barouch DH. Single-shot Ad26 vaccine protects against SARS-CoV-2 in rhesus macaques. Nature. 2020 Jul 30. doi: 10.1038/s41586-020-2607-z. Epub ahead of print. PMID: 32731257.

Bajic G, Maron MJ, Caradonna TM, Tian M, Mermelstein A, Fera D, Kelsoe G, Kuraoka M, Schmidt AG. Structure-Guided Molecular Grafting of a Complex Broadly Neutralizing Viral Epitope. ACS Infect Dis. 2020 May 8;6(5):1182-1191. doi: 10.1021/acsinfecdis.0c00008. Epub 2020 Apr 20. PMID: 32267676; PMCID: PMC7291361.

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Norman M, Gilboa T, Ogata AF, Maley AM, Cohen L, Cai Y, Zhang J, Feldman JE, Hauser BM, Caradonna TM, Chen B, Schmidt AG, Alter G, Charles RC, Ryan ET, Walt DR. Ultra-Sensitive High-Resolution Profiling of Anti-SARS-CoV-2 Antibodies for Detecting Early Seroconversion in COVID-19 Patients. medRxiv [Preprint]. 2020 May 2:2020.04.28.20083691. doi: 10.1101/2020.04.28.20083691. PMID: 32511657; PMCID: PMC7277013.

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Lemieux M, Colazo JM, Kienka T, Zhakyp A. A Basis to Be Here: Stories from International Graduate Students in the United States. Cell Rep Med. 2020 Sep 22;1(6):100100. doi: 10.1016/j.xcrm.2020.100100. PMID: 32984857; PMCID: PMC7508047.

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Nwanaji-Enwerem JC, Allen JG, Beamer PI. Another invisible enemy indoors: COVID-19, human health, the home, and United States indoor air policy. J Expo Sci Environ Epidemiol. 2020 Sep;30(5):773-775. doi: 10.1038/s41370-020-0247-x. Epub 2020 Jul 8. PMID: 32641763; PMCID: PMC7341994.

Nwanaji-Enwerem JC, Colicino E, Specht AJ, Gao X, Wang C, Vokonas P, Weisskopf MG, Boyer EW, Baccarelli AA, Schwartz J. Individual species and cumulative mixture relationships of 24-hour urine metal concentrations with DNA methylation age variables in older men. Environ Res. 2020 Jul;186:109573. doi: 10.1016/j.envres.2020.109573. Epub 2020 Apr 25. PMID: 32361261; PMCID: PMC7363532.

Nwanaji-Enwerem JC, Nwanaji-Enwerem U, Van Der Laan L, Galazka JM, Redeker NS, Cardenas A. A Longitudinal Epigenetic Aging and Leukocyte Analysis of Simulated Space Travel: The Mars-500 Mission. Cell Rep. 2020 Nov 10:108406. doi: 10.1016/j.celrep.2020.108406. Epub ahead of print. PMID: 33242403.

Orozco JM, Krawczyk PA, Scaria SM, Cangelosi AL, Chan SH, Kunchok T, Lewis CA, Sabatini DM. Dihydroxyacetone phosphate signals glucose availability to mTORC1. Nat Metab. 2020 Jul 27. doi: 10.1038/s42255-020-0250-5. Epub ahead of print. PMID: 32719541.

Do T, Page JE, Walker S. Uncovering the activities, biological roles, and regulation of bacterial cell wall hydrolases and tailoring enzymes. J Biol Chem. 2020 Mar 6;295(10):3347-3361. doi: 10.1074/jbc.REV119.010155. Epub 2020 Jan 23. PMID: 31974163; PMCID: PMC7062177.

Bowling S, Sritharan D, Osorio FG, Nguyen M, Cheung P, Rodriguez-Fraticelli A, Patel S, Yuan WC, Fujiwara Y, Li BE, Orkin SH, Hormoz S, Camargo FD. An Engineered CRISPR-Cas9 Mouse Line for Simultaneous Readout of Lineage Histories and Gene Expression Profiles in Single Cells. Cell. 2020 Jun 11;181(6):1410-1422.e27. doi: 10.1016/j.cell.2020.04.048. Epub 2020 May 14. Erratum in: Cell. 2020 Jun 25;181(7):1693-1694. PMID: 32413320; PMCID: PMC7529102.

Bowling S, Sritharan D, Osorio FG, Nguyen M, Cheung P, Rodriguez-Fraticelli A, Patel S, Yuan WC, Fujiwara Y, Li BE, Orkin SH, Hormoz S, Camargo FD. An Engineered CRISPR-Cas9 Mouse Line for Simultaneous Readout of Lineage Histories and Gene Expression Profiles in Single Cells. Cell. 2020 Jun 25;181(7):1693-1694. doi: 10.1016/j.cell.2020.06.018. Erratum for: Cell. 2020 Jun 11;181(6):1410-1422.e27. PMID: 32589959; PMCID: PMC7530571.

Yu C, Wang L, Rowe RG, Han A, Ji W, McMahon C, Baier AS, Huang YC, Marion W, Pearson DS, Kruse AC, Daley GQ, Wu H, Sliz P. A nanobody targeting the LIN28:let-7 interaction fragment of TUT4 blocks uridylation of let-7. Proc Natl Acad Sci U S A. 2020 Mar 3;117(9):4653-4663. doi: 10.1073/pnas.1919409117. Epub 2020 Feb 14. PMID: 32060122; PMCID: PMC7060709.

Arizti-Sanz J, Freije CA, Stanton AC, Petros BA, Boehm CK, Siddiqui S, Shaw BM, Adams G, Kosoko-Thoroddsen TF, Kemball ME, Uwanibe JN, Ajogbasile FV, Eromon PE, Gross R, Wronka L, Caviness K, Hensley LE, Bergman NH, MacInnis BL, Happi CT, Lemieux JE, Sabeti PC, Myhrvold C. Streamlined inactivation, amplification, and Cas13-based detection of SARS-CoV-2. Nat Commun. 2020 Nov 20;11(1):5921. doi: 10.1038/s41467-020-19097-x. PMID: 33219225.

Miller DG, Pierson L, Doernberg S. The Role of Medical Students During the COVID-19 Pandemic. Ann Intern Med. 2020 Jul 21;173(2):145-146. doi: 10.7326/M20-1281. Epub 2020 Apr 7. PMID: 32259194; PMCID: PMC7151405.

Pierson L, Gibert S, Berkman B, Danis M, Millum J. Allocation of scarce biospecimens for use in research. J Med Ethics. 2020 Mar 27:medethics-2019-105766. doi: 10.1136/medethics-2019-105766. Epub ahead of print. PMID: 32220871.

Tyan K, Levin A, Avalos-Pacheco A, Plana D, Rand EA, Yang H, Maliszewski LE, Chylek LA, Atta L, Tye MA, Carmack MM, Oglesby NS, Burgin S, Yu SH, LeBoeuf NR, Kemp JM. Considerations for the Selection and Use of Disinfectants Against SARS-CoV-2 in a Health Care Setting. Open Forum Infect Dis. 2020 Aug 31;7(9):ofaa396. doi: 10.1093/ofid/ofaa396. PMID: 32989420; PMCID: PMC7499694.

Mostaghimi A,* Antonini MJ,* Plana D,* Anderson PD, Beller B, Boyer EW, Fannin A, Freake J, Oakley R, Sinha MS, Smith L, Van C, Yang H, Sorger PK, LeBoeuf NR, Yu SH. Regulatory and Safety Considerations in Deploying a Locally Fabricated, Reusable Face Shield in a Hospital Responding to the COVID-19 Pandemic. Med (N Y). 2020 Jun 19. doi: 10.1016/j.medj.2020.06.003. Epub ahead of print. PMID: 32838357; PMCID: PMC7304404.

Palmer AC*, Plana D*, Gao H*, Korn JM, Yang G, Green J, Zhang X, Velazquez R, McLaughlin ME, Ruddy DA, Kowal C, Muszynski J, Bullock C, Rivera S, Rakiec DP, Elliott G, Fordjour P, Meyer R, Loo A, Kurth E, Engelman JA, Bitter H, Sellers WR, Williams JA, Sorger PK. A Proof of Concept for Biomarker-Guided Targeted Therapy against Ovarian Cancer Based on Patient-Derived Tumor Xenografts. Cancer Res. 2020 Oct 1;80(19):4278-4287. doi: 10.1158/0008-5472.CAN-19-3850. Epub 2020 Aug 3. PMID: 32747364; PMCID: PMC7541581.

Palmer AC, Plana D, Sorger PK. Comparing the Efficacy of Cancer Therapies between Subgroups in Basket Trials. Cell Syst. 2020 Nov 18;11(5):449-460.e2. doi: 10.1016/j.cels.2020.09.003. PMID: 33220857; PMCID: PMC8022348.

Shi A, Kasumova GG, Michaud WA, Cintolo-Gonzalez J, Díaz-Martínez M, Ohmura J, Mehta A, Chien I, Frederick DT, Cohen S, Plana D, Johnson D, Flaherty KT, Sullivan RJ, Kellis M, Boland GM. Plasma-derived extracellular vesicle analysis and deconvolution enable prediction and tracking of melanoma checkpoint blockade outcome. Sci Adv. 2020 Nov 13;6(46):eabb3461. doi: 10.1126/sciadv.abb3461. PMID: 33188016; PMCID: PMC7673759.

Christodoulou C, Spencer JA, Yeh SA, Turcotte R, Kokkaliaris KD, Panero R, Ramos A, Guo G, Seyedhassantehrani N, Esipova TV, Vinogradov SA, Rudzinskas S, Zhang Y, Perkins AS, Orkin SH, Calogero RA, Schroeder T, Lin CP, Camargo FD. Live-animal imaging of native haematopoietic stem and progenitor cells. Nature. 2020 Feb;578(7794):278-283. doi: 10.1038/s41586-020-1971-z. Epub 2020 Feb 5. PMID: 32025033; PMCID: PMC7021587.

W Kim D, Raoof S, Lamba N, Lee G, S Bitterman D, R Mahal A, N Sanford N, B Lam M, J Mamon H. Definitive re-irradiation of locally recurrent esophageal cancer after trimodality therapy in patients with a poor performance status. Mol Clin Oncol. 2020 Jul;13(1):27-32. doi: 10.3892/mco.2020.2044. Epub 2020 May 11. PMID: 32454972; PMCID: PMC7241232.

Rencsok EM, Bazzi LA, McKay RR, Huang FW, Friedant A, Vinson J, Peisch S, Zarif JC, Simmons S, Hawthorne K, Villanti P, Kantoff PW, Heath E, George DJ, Mucci LA. Diversity of Enrollment in Prostate Cancer Clinical Trials: Current Status and Future Directions. Cancer Epidemiol Biomarkers Prev. 2020 Jul;29(7):1374-1380. doi: 10.1158/1055-9965.EPI-19-1616. Epub 2020 Jun 5. PMID: 32503813; PMCID: PMC7334076.

van de Geijn B, Finucane H, Gazal S, Hormozdiari F, Amariuta T, Liu X, Gusev A, Loh PR, Reshef Y, Kichaev G, Raychauduri S, Price AL. Annotations capturing cell type-specific TF binding explain a large fraction of disease heritability. Hum Mol Genet. 2020 May 8;29(7):1057-1067. doi: 10.1093/hmg/ddz226. PMID: 31595288; PMCID: PMC7206853.

Huang AY, Li P, Rodin RE, Kim SN, Dou Y, Kenny CJ, Akula SK, Hodge RD, Bakken TE, Miller JA, Lein ES, Park PJ, Lee EA, Walsh CA. Parallel RNA and DNA analysis after deep sequencing (PRDD-seq) reveals cell type-specific lineage patterns in human brain. Proc Natl Acad Sci U S A. 2020 Jun 23;117(25):13886-13895. doi: 10.1073/pnas.2006163117. Epub 2020 Jun 10. PMID: 32522880; PMCID: PMC7322034.

Dou Y, Kwon M, Rodin RE, Cortés-Ciriano I, Doan R, Luquette LJ, Galor A, Bohrson C, Walsh CA, Park PJ. Accurate detection of mosaic variants in sequencing data without matched controls. Nat Biotechnol. 2020 Mar;38(3):314-319. doi: 10.1038/s41587-019-0368-8. Epub 2020 Jan 6. PMID: 31907404; PMCID: PMC7065972.

Ma KC, Mortimer TD, Hicks AL, Wheeler NE, Sánchez-Busó L, Golparian D, Taiaroa G, Rubin DHF, Wang Y, Williamson DA, Unemo M, Harris SR, Grad YH. Adaptation to the cervical environment is associated with increased antibiotic susceptibility in Neisseria gonorrhoeae. Nat Commun. 2020 Aug 17;11(1):4126. doi: 10.1038/s41467-020-17980-1. PMID: 32807804; PMCID: PMC7431566.

Palace SG, Wang Y, Rubin DH, Welsh MA, Mortimer TD, Cole K, Eyre DW, Walker S, Grad YH. RNA polymerase mutations cause cephalosporin resistance in clinical Neisseria gonorrhoeae isolates. Elife. 2020 Feb 3;9:e51407. doi: 10.7554/eLife.51407. PMID: 32011233; PMCID: PMC7012608.

Rubin DHF, Ross JDC, Grad YH. The frontiers of addressing antibiotic resistance in Neisseria gonorrhoeae. Transl Res. 2020 Jun;220:122-137. doi: 10.1016/j.trsl.2020.02.002. Epub 2020 Feb 29. PMID: 32119845; PMCID: PMC7293957.

Low DM, Rumker L, Talkar T, Torous J, Cecchi G, Ghosh SS. Natural Language Processing Reveals Vulnerable Mental Health Support Groups and Heightened Health Anxiety on Reddit During COVID-19: Observational Study. J Med Internet Res. 2020 Oct 12;22(10):e22635. doi: 10.2196/22635. PMID: 32936777.

Muema DM, Mthembu M, Schiff AE, Singh U, Corleis B, Chen D, Bassett T, Rasehlo SS, Nyamande K, Khan DF, Maharaj P, Mitha M, Suleman M, Mhlane Z, Naidoo T, Ramjit D, Karim F, Kwon DS, Ndung'u T, Wong EB. Contrasting Inflammatory Signatures in Peripheral Blood and Bronchoalveolar Cells Reveal Compartment-Specific Effects of HIV Infection. Front Immunol. 2020 May 19;11:864. doi: 10.3389/fimmu.2020.00864. PMID: 32508817; PMCID: PMC7248324.

Oberfeld B, Achanta A, Carpenter K, Chen P, Gilette NM, Langat P, Said JT, Schiff AE, Zhou AS, Barczak AK, Pillai S. SnapShot: COVID-19. Cell. 2020 May 14;181(4):954-954.e1. doi: 10.1016/j.cell.2020.04.013. Epub 2020 Apr 30. PMID: 32413300; PMCID: PMC7190493.

Kost-Alimova M, Sidhom EH, Satyam A, Chamberlain BT, Dvela-Levitt M, Melanson M, Alper SL, Santos J, Gutierrez J, Subramanian A, Byrne PJ, Grinkevich E, Reyes-Bricio E, Kim C, Clark AR, Watts AJB, Thompson R, Marshall J, Pablo JL, Coraor J, Roignot J, Vernon KA, Keller K, Campbell A, Emani M, Racette M, Bazua-Valenti S, Padovano V, Weins A, McAdoo SP, Tam FWK, Ronco L, Wagner F, Tsokos GC, Shaw JL, Greka A. A High-Content Screen for Mucin-1-Reducing Compounds Identifies Fostamatinib as a Candidate for Rapid Repurposing for Acute Lung Injury. Cell Rep Med. 2020 Oct 29;1(8):100137. doi: 10.1016/j.xcrm.2020.100137. PMID: 33294858; PMCID: PMC7691435

Słabicki M, Kozicka Z, Petzold G, Li YD, Manojkumar M, Bunker RD, Donovan KA, Sievers QL, Koeppel J, Suchyta D, Sperling AS, Fink EC, Gasser JA, Wang LR, Corsello SM, Sellar RS, Jan M, Gillingham D, Scholl C, Fröhling S, Golub TR, Fischer ES, Thomä NH, Ebert BL. The CDK inhibitor CR8 acts as a molecular glue degrader that depletes cyclin K. Nature. 2020 Sep;585(7824):293-297. doi: 10.1038/s41586-020-2374-x. Epub 2020 Jun 3. PMID: 32494016; PMCID: PMC7486275.

Starkweather CK, Choi BD, Alvarez-Breckenridge C, Brastianos PK, Oh K, Wang N, Shih H, Nahed BV. Initial Approach to the Patient with Multiple Newly Diagnosed Brain Metastases. Neurosurg Clin N Am. 2020 Oct;31(4):505-513. doi: 10.1016/j.nec.2020.05.002. PMID: 32921347.

Dabney W, Kurth-Nelson Z, Uchida N, Starkweather CK, Hassabis D, Munos R, Botvinick M. A distributional code for value in dopamine-based reinforcement learning. Nature. 2020 Jan;577(7792):671-675. doi: 10.1038/s41586-019-1924-6. Epub 2020 Jan 15. PMID: 31942076; PMCID: PMC7476215.

Starkweather CK, Uchida N. Dopamine signals as temporal difference errors: recent advances. Curr Opin Neurobiol. 2020 Nov 10;67:95-105. doi: 10.1016/j.conb.2020.08.014. Epub ahead of print. PMID: 33186815.

Saeedi Saravi SS, Eroglu E, Waldeck-Weiermair M, Sorrentino A, Steinhorn B, Belousov V, Michel T. Differential endothelial signaling responses elicited by chemogenetic H2O2 synthesis. Redox Biol. 2020 Sep;36:101605. doi: 10.1016/j.redox.2020.101605. Epub 2020 Jun 16. PMID: 32590330; PMCID: PMC7322171.

Kodani A, Kenny C, Lai A, Gonzalez DM, Stronge E, Sejourne GM, Isacco L, Partlow JN, O'Donnell A, McWalter K, Byrne AB, Barkovich AJ, Yang E, Hill RS, Gawlinski P, Wiszniewski W, Cohen JS, Fatemi SA, Baranano KW, Sahin M, Vossler DG, Yuskaitis CJ, Walsh CA. Posterior Neocortex-Specific Regulation of Neuronal Migration by CEP85L Identifies Maternal Centriole-Dependent Activation of CDK5. Neuron. 2020 Apr 22;106(2):246-255.e6. doi: 10.1016/j.neuron.2020.01.030. Epub 2020 Feb 24. PMID: 32097629; PMCID: PMC7255387.

Su MY, Das S. Expansion of asynchronous teledermatology during the COVID-19 pandemic. J Am Acad Dermatol. 2020 Aug 18:S0190-9622(20)32446-4. doi: 10.1016/j.jaad.2020.08.054. Epub ahead of print. PMID: 32822793; PMCID: PMC7434450

Su MY, Lilly E, Yu J, Das S. Asynchronous teledermatology in medical education: Lessons from the COVID-19 pandemic. J Am Acad Dermatol. 2020 Sep;83(3):e267-e268. doi: 10.1016/j.jaad.2020.06.033. Epub 2020 Jun 14. PMID: 32553635; PMCID: PMC7293835.

Eisen TJ, Eichhorn SW, Subtelny AO, Lin KS, McGeary SE, Gupta S, Bartel DP. The Dynamics of Cytoplasmic mRNA Metabolism. Mol Cell. 2020 Feb 20;77(4):786-799.e10. doi: 10.1016/j.molcel.2019.12.005. Epub 2020 Jan 2. PMID: 31902669; PMCID: PMC7265681.

Eisen TJ, Eichhorn SW, Subtelny AO, Bartel DP. MicroRNAs Cause Accelerated Decay of Short-Tailed Target mRNAs. Mol Cell. 2020 Feb 20;77(4):775-785.e8. doi: 10.1016/j.molcel.2019.12.004. Epub 2020 Jan 2. PMID: 31902668; PMCID: PMC7096130.

Peterson QP, Veres A, Chen L, Slama MQ, Kenty JHR, Hassoun S, Brown MR, Dou H, Duffy CD, Zhou Q, Matveyenko AV, Tyrberg B, Sörhede-Winzell M, Rorsman P, Melton DA. A method for the generation of human stem cell-derived alpha cells. Nat Commun. 2020 May 7;11(1):2241. doi: 10.1038/s41467-020-16049-3. PMID: 32382023; PMCID: PMC7205884.

Vigue, Dana. "Future Physicians During Physical Distancing- Medical Students' Roles During COVID-19." Harvard Medical Student Review. 10 May 2020. https://www.hmsreview.org/covid/future-physicians-during-physical-distancing

Liu Y, Hegarty S, Winter C, Wang F, He Z. Viral vectors for neuronal cell type-specific visualization and manipulations. Curr Opin Neurobiol. 2020 Aug;63:67-76. doi: 10.1016/j.conb.2020.03.011. Epub 2020 Apr 25. PMID: 32344323; PMCID: PMC7484153.

Choi S, Hachisuka J, Brett MA, Magee AR, Omori Y, Iqbal NU, Zhang D, DeLisle MM, Wolfson RL, Bai L, Santiago C, Gong S, Goulding M, Heintz N, Koerber HR, Ross SE, Ginty DD. Parallel ascending spinal pathways for affective touch and pain. Nature. 2020 Nov;587(7833):258-263. doi: 10.1038/s41586-020-2860-1. Epub 2020 Oct 28. PMID: 33116307; PMCID: PMC7666110.

Wong AY, Whited JL. Parallels between wound healing, epimorphic regeneration and solid tumors. Development. 2020 Jan 2;147(1):dev181636. doi: 10.1242/dev.181636. PMID: 31898582.

Wang K, Yaghi OK, Spallanzani RG, Chen X, Zemmour D, Lai N, Chiu IM, Benoist C, Mathis D. Neuronal, stromal, and T-regulatory cell crosstalk in murine skeletal muscle. Proc Natl Acad Sci U S A. 2020 Mar 10;117(10):5402-5408. doi: 10.1073/pnas.1922559117. Epub 2020 Feb 26. PMID: 32102913; PMCID: PMC7071852.

Reddy A, Bozi LHM, Yaghi OK, Mills EL, Xiao H, Nicholson HE, Paschini M, Paulo JA, Garrity R, Laznik-Bogoslavski D, Ferreira JCB, Carl CS, Sjøberg KA, Wojtaszewski JFP, Jeppesen JF, Kiens B, Gygi SP, Richter EA, Mathis D, Chouchani ET. pH-Gated Succinate Secretion Regulates Muscle Remodeling in Response to Exercise. Cell. 2020 Oct 1;183(1):62-75.e17. doi: 10.1016/j.cell.2020.08.039. Epub 2020 Sep 17. PMID: 32946811.

Thaventhiran JED, Lango Allen H, Burren OS, Rae W, Greene D, Staples E, Zhang Z, Farmery JHR, Simeoni I, Rivers E, Maimaris J, Penkett CJ, Stephens J, Deevi SVV, Sanchis-Juan A, Gleadall NS, Thomas MJ, Sargur RB, Gordins P, Baxendale HE, Brown M, Tuijnenburg P, Worth A, Hanson S, Linger RJ, Buckland MS, Rayner-Matthews PJ, Gilmour KC, Samarghitean C, Seneviratne SL, Sansom DM, Lynch AG, Megy K, Ellinghaus E, Ellinghaus D, Jorgensen SF, Karlsen TH, Stirrups KE, Cutler AJ, Kumararatne DS, Chandra A, Edgar JDM, Herwadkar A, Cooper N, Grigoriadou S, Huissoon AP, Goddard S, Jolles S, Schuetz C, Boschann F; Primary Immunodeficiency Consortium for the NIHR Bioresource, Lyons PA, Hurles ME, Savic S, Burns SO, Kuijpers TW, Turro E, Ouwehand WH, Thrasher AJ, Smith KGC. Whole-genome sequencing of a sporadic primary immunodeficiency cohort. Nature. 2020 Jul;583(7814):90-95. doi: 10.1038/s41586-020-2265-1. Epub 2020 May 6. Erratum in: Nature. 2020 Aug;584(7819):E2. PMID: 32499645; PMCID: PMC7334047.

Ziegler CGK, Allon SJ, Nyquist SK, Mbano IM, Miao VN, Tzouanas CN, Cao Y, Yousif AS, Bals J, Hauser BM, Feldman J, Muus C, Wadsworth MH 2nd, Kazer SW, Hughes TK, Doran B, Gatter GJ, Vukovic M, Taliaferro F, Mead BE, Guo Z, Wang JP, Gras D, Plaisant M, Ansari M, Angelidis I, Adler H, Sucre JMS, Taylor CJ, Lin B, Waghray A, Mitsialis V, Dwyer DF, Buchheit KM, Boyce JA, Barrett NA, Laidlaw TM, Carroll SL, Colonna L, Tkachev V, Peterson CW, Yu A, Zheng HB, Gideon HP, Winchell CG, Lin PL, Bingle CD, Snapper SB, Kropski JA, Theis FJ, Schiller HB, Zaragosi LE, Barbry P, Leslie A, Kiem HP, Flynn JL, Fortune SM, Berger B, Finberg RW, Kean LS, Garber M, Schmidt AG, Lingwood D, Shalek AK, Ordovas-Montanes J; HCA Lung Biological Network. Electronic address: lung-network@humancellatlas.org; HCA Lung Biological Network. SARS-CoV-2 Receptor ACE2 Is an Interferon-Stimulated Gene in Human Airway Epithelial Cells and Is Detected in Specific Cell Subsets across Tissues. Cell. 2020 May 28;181(5):1016-1035.e19. doi: 10.1016/j.cell.2020.04.035. Epub 2020 Apr 27. PMID: 32413319; PMCID: PMC7252096.

Kazer SW, Aicher TP, Muema DM, Carroll SL, Ordovas-Montanes J, Miao VN, Tu AA, Ziegler CGK, Nyquist SK, Wong EB, Ismail N, Dong M, Moodley A, Berger B, Love JC, Dong KL, Leslie A, Ndhlovu ZM, Ndung'u T, Walker BD, Shalek AK. Integrated single-cell analysis of multicellular immune dynamics during hyperacute HIV-1 infection. Nat Med. 2020 Apr;26(4):511-518. doi: 10.1038/s41591-020-0799-2. Epub 2020 Mar 23. PMID: 32251406; PMCID: PMC7237067.

McBride MJ, Mashtalir N, Winter EB, Dao HT, Filipovski M, D'Avino AR, Seo HS, Umbreit NT, St Pierre R, Valencia AM, Qian K, Zullow HJ, Jaffe JD, Dhe-Paganon S, Muir TW, Kadoch C. The nucleosome acidic patch and H2A ubiquitination underlie mSWI/SNF recruitment in synovial sarcoma. Nat Struct Mol Biol. 2020 Sep;27(9):836-845. doi: 10.1038/s41594-020-0466-9. Epub 2020 Aug 3. PMID: 32747783.

 

2019

Abudayyeh OO, Gootenberg JS, Franklin B, Koob J, Kellner MJ, Ladha A, Joung J, Kirchgatterer P, Cox DBT, Zhang F. A cytosine deaminase for programmable single-base RNA editing. Science. 2019 Jul 26;365(6451):382-386. doi: 10.1126/science.aax7063. Epub 2019 Jul 11. PubMed PMID: 31296651.

Toepfer CN, Sharma A, Cicconet M, Garfinkel AC, Mücke M, Neyazi M, Willcox JAL, Agarwal R, Schmid M, Rao J, Ewoldt J, Pourquié O, Chopra A, Chen CS, Seidman JG, Seidman CE. SarcTrack. Circ Res. 2019 Apr 12;124(8):1172-1183. doi: 10.1161/CIRCRESAHA.118.314505. PubMed PMID: 30700234; PubMed Central PMCID: PMC6485312.

Zhang L, Zhang Y, Cai T, Ahuja Y, He Z, Ho YL, Beam A, Cho K, Carroll R, Denny J, Kohane I, Liao K, Cai T. Automated grouping of medical codes via multiview banded spectral clustering. J Biomed Inform. 2019 Dec;100:103322. doi: 10.1016/j.jbi.2019.103322. Epub 2019 Oct 28. PMID: 31672532; PMCID: PMC7261410.

Ng SR, Rideout WM 3rd, Akama-Garren EH, Bhutkar A, Mercer KL, Schenkel JM, Bronson RT, Jacks T. CRISPR-mediated modeling and functional validation of candidate tumor suppressor genes in small cell lung cancer. Proc Natl Acad Sci U S A. 2020 Jan 7;117(1):513-521. doi: 10.1073/pnas.1821893117. Epub 2019 Dec 23. PMID: 31871154; PMCID: PMC6955235.

Bhashyam AR, Basilico M, Harris MB, Heng M. Reply to Letter to the Editor: Prescription Opioid Type and the Likelihood of Prolonged Opioid Use After Orthopaedic Surgery. J Am Acad Orthop Surg. 2019 Apr 16. doi: 10.5435/JAAOS-D-19-00114. [Epub ahead of print] PubMed PMID: 31008876

Schwartz AL, Basilico MF, Friedman JL. Lactates and Local Knowledge - A Parable of Teamwork. N Engl J Med. 2019 Apr 11;380(15):1392-1393. doi: 10.1056/NEJMp1815228. PubMed PMID: 30970185.

Bhashyam AR, Basilico M, Weaver MJ, Harris MB, Heng M. Using Historical Variation in Opioid Prescribing Immediately After Fracture Surgery to Guide Maximum Initial Prescriptions. J Orthop Trauma. 2019 Apr;33(4):e131-e136. doi: 10.1097/BOT.0000000000001392. PubMed PMID: 30570619; PubMed Central PMCID: PMC6599458.

Basilico M, Bhashyam AR, Harris MB, Heng M. Prescription Opioid Type and the Likelihood of Prolonged Opioid Use After Orthopaedic Surgery. J Am Acad Orthop Surg. 2019 May 1;27(9):e423-e429. doi: 10.5435/JAAOS-D-17-00663. PubMed PMID:30289795; PubMed Central PMCID: PMC6590520.

Basilico, M.F., Bhashyam A.R., Harrington, E., & Heng, M.. Initial Opioid Supply Influences Long-Term Use and Doctor Shopping: An Instrumental Variables Approach. Journal of the American College of Surgeons. 2018, Oct; 227(4): S151-S152

Basilico, M.F., Bhashyam A.R., Heng M.. Racial Bias in Initial Opioid Prescribing for Orthopaedic Trauma Patients. Journal of the
American College of Surgeons. 2018, Oct; 227(4): S160

Cote DJ, Bever AM, Wilson KM, Smith TR, Smith-Warner SA, Stampfer MJ. A prospective study of tea and coffee intake and risk of glioma. Int J Cancer. 2019 Jul 15. doi: 10.1002/ijc.32574. [Epub ahead of print] PubMed PMID: 31304976

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Botelho, Alyssa. "The Insights of Radical Science in the CRISPR Gene-Editing Era: A History of Science for the People and the Cambridge Recombinant DNA Controversy." Science as Culture (June 2019): 1-30. DOI: 10.1080/09505431.2019.1623190

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Riordan CP, Storey A, Cote DJ, Smith ER, Scott RM. Results of more than 20 years of follow-up in pediatric patients with moyamoya disease undergoing pial synangiosis. J Neurosurg Pediatr. 2019 Mar 1:1-7. doi: 10.3171/2019.1.PEDS18457. [Epub ahead of print] PubMed PMID: 30835683.

Cote DJ, Barnett I, Onnela JP, Smith TR. Digital Phenotyping in Patients with Spine Disease: A Novel Approach to Quantifying Mobility and Quality of Life. World Neurosurg. 2019 Jun;126:e241-e249. doi: 10.1016/j.wneu.2019.01.297. Epub 2019 Feb 22. PubMed PMID: 30797933; PubMed Central PMCID: PMC6706326.

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Cote DJ, Dasenbrock HH, Gormley WB, Smith TR, Dunn IF. Adverse Events After Microvascular Decompression: A National Surgical Quality Improvement Program Analysis. World Neurosurg. 2019 Aug;128:e884-e894. doi: 10.1016/j.wneu.2019.05.022. Epub 2019 May 11. PubMed PMID: 31082546; PubMed Central PMCID: PMC6825526.

Cote DJ, Ostrom QT, Gittleman H, Duncan KR, CreveCoeur TS, Kruchko C, Smith TR, Stampfer MJ, Barnholtz-Sloan JS. Glioma incidence and survival variations by county-level socioeconomic measures. Cancer. 2019 Oct 1;125(19):3390-3400. doi: 10.1002/cncr.32328. Epub 2019 Jun 17. PubMed PMID: 31206646; PubMed Central PMCID: PMC6744292.

Scott KW, Callahan DG, Chen JJ, Lynn MH, Cote DJ, Morenz A, Fisher J, Antoine VL, Lemoine ER, Bakshi SK, Stuart J, Hundert EM, Chang BS, Gooding H. Fostering Student-Faculty Partnerships for Continuous Curricular Improvement in Undergraduate Medical Education. Acad Med. 2019 Jul;94(7):996-1001. doi: 10.1097/ACM.0000000000002726. PubMed PMID: 30920449.

Ostrom QT, Fahmideh MA, Cote DJ, Muskens IS, Schraw JM, Scheurer ME, Bondy ML. Risk factors for childhood and adult primary brain tumors. Neuro Oncol. 2019 Nov  4;21(11):1357-1375. doi: 10.1093/neuonc/noz123. PubMed PMID: 31301133

Senders JT, Staples P, Mehrtash A, Cote DJ, Taphoorn MJB, Reardon DA, Gormley  WB, Smith TR, Broekman ML, Arnaout O. An Online Calculator for the Prediction of  Survival in Glioblastoma Patients Using Classical Statistics and Machine Learning. Neurosurgery. 2019 Oct 5. pii: nyz403. doi: 10.1093/neuros/nyz403. [Epub ahead of print] PubMed PMID: 31586211.

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van Galen P, Hovestadt V, Wadsworth Ii MH, Hughes TK, Griffin GK, Battaglia S, Verga JA, Stephansky J, Pastika TJ, Lombardi Story J, Pinkus GS, Pozdnyakova O, Galinsky I, Stone RM, Graubert TA, Shalek AK, Aster JC, Lane AA, Bernstein BE. Single-Cell RNA-Seq Reveals AML Hierarchies Relevant to Disease Progression and Immunity. Cell. 2019 Mar 7;176(6):1265-1281.e24. doi: 10.1016/j.cell.2019.01.031. Epub 2019 Feb 28. PMID: 30827681; PMCID: PMC6515904.

Aicher TP, Carroll S, Raddi G, Gierahn T, Wadsworth MH 2nd, Hughes TK, Love C, Shalek AK. Seq-Well: A Sample-Efficient, Portable Picowell Platform for Massively Parallel Single-Cell RNA Sequencing. Methods Mol Biol. 2019;1979:111-132. doi: 10.1007/978-1-4939-9240-9_8. PMID: 31028635.

Spallanzani RG, Zemmour D, Xiao T, Jayewickreme T, Li C, Bryce PJ, Benoist C, Mathis D. Distinct immunocyte-promoting and adipocyte-generating stromal components coordinate adipose tissue immune and metabolic tenors. Sci Immunol. 2019 May 3;4(35):eaaw3658. doi: 10.1126/sciimmunol.aaw3658. PMID: 31053654; PMCID: PMC6648660.

Kalluri AS, Vellarikkal SK, Edelman ER, Nguyen L, Subramanian A, Ellinor PT, Regev A, Kathiresan S, Gupta RM. Single-Cell Analysis of the Normal Mouse Aorta Reveals Functionally Distinct Endothelial Cell Populations. Circulation. 2019 Jul 9;140(2):147-163. doi: 10.1161/CIRCULATIONAHA.118.038362. Epub 2019 May 31. PMID: 31146585; PMCID: PMC6693656.

Candelaria L, Kalugin PN, Kowalski BM, Kalugin NG. Covalent Epitope Decoration of Carbon Electrodes using Solid Phase Peptide Synthesis. Sci Rep. 2019;9(1):17805. Published 2019 Nov 28. doi:10.1038/s41598-019-54000-9

Karandinos G, Bourgois P. The Structural Violence of Hyperincarceration - A 44-Year-Old Man with Back Pain. N Engl J Med. 2019 Jan 17;380(3):205-209. doi: 10.1056/NEJMp1811542. PMID: 30650324; PMCID: PMC6689242.

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Mikhael JG, Gershman SJ. Adapting the flow of time with dopamine. J Neurophysiol. 2019 May 1;121(5):1748-1760. doi: 10.1152/jn.00817.2018. Epub 2019 Mar 13. PMID: 30864882; PMCID: PMC6589719.

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Lo WL, Shah NH, Rubin SA, Zhang W, Horkova V, Fallahee IR, Stepanek O, Zon LI, Kuriyan J, Weiss A. Slow phosphorylation of a tyrosine residue in LAT optimizes T cell ligand discrimination. Nat Immunol. 2019 Nov;20(11):1481-1493. doi: 10.1038/s41590-019-0502-2. Epub 2019 Oct 14. PMID: 31611699; PMCID: PMC6858552.

Park JO, Tanner LB, Wei MH, Khana DB, Jacobson TB, Zhang Z, Rubin SA, Li SH, Higgins MB, Stevenson DM, Amador-Noguez D, Rabinowitz JD. Near-equilibrium glycolysis supports metabolic homeostasis and energy yield. Nat Chem Biol. 2019 Oct;15(10):1001-1008. doi: 10.1038/s41589-019-0364-9. Epub 2019 Sep 23. PMID: 31548693.

Corleis B, Bucsan AN, Deruaz M, Vrbanac VD, Lisanti-Park AC, Gates SJ, Linder AH, Paer JM, Olson GS, Bowman BA, Schiff AE, Medoff BD, Tager AM, Luster AD, Khader SA, Kaushal D, Kwon DS. HIV-1 and SIV Infection Are Associated with Early Loss of Lung Interstitial CD4+ T Cells and Dissemination of Pulmonary Tuberculosis. Cell Rep. 2019 Feb 5;26(6):1409-1418.e5. doi: 10.1016/j.celrep.2019.01.021. PMID: 30726727; PMCID: PMC6417097.

Flavahan WA, Drier Y, Johnstone SE, Hemming ML, Tarjan DR, Hegazi E, Shareef SJ, Javed NM, Raut CP, Eschle BK, Gokhale PC, Hornick JL, Sicinska ET, Demetri GD, Bernstein BE. Altered chromosomal topology drives oncogenic programs in SDH-deficient GISTs. Nature. 2019 Nov;575(7781):229-233. doi: 10.1038/s41586-019-1668-3. Epub 2019 Oct 16. PMID: 31666694; PMCID: PMC6913936.

Subramanian A*, Sidhom EH*, Emani M, Vernon K, Sahakian N, Zhou Y, Kost-Alimova M, Slyper M, Waldman J, Dionne D, Nguyen LT, Weins A, Marshall JL, Rosenblatt-Rosen O, Regev A, Greka A. Single cell census of human kidney organoids shows reproducibility and diminished off-target cells after transplantation. Nat Commun. 2019 Nov 29;10(1):5462. doi: 10.1038/s41467-019-13382-0. PMID: 31784515; PMCID: PMC6884507.

Dvela-Levitt M, Kost-Alimova M, Emani M, Kohnert E, Thompson R, Sidhom EH, Rivadeneira A, Sahakian N, Roignot J, Papagregoriou G, Montesinos MS, Clark AR, McKinney D, Gutierrez J, Roth M, Ronco L, Elonga E, Carter TA, Gnirke A, Melanson M, Hartland K, Wieder N, Hsu JC, Deltas C, Hughey R, Bleyer AJ, Kmoch S, Živná M, BareÅ¡ova V, Kota S, Schlondorff J, Heiman M, Alper SL, Wagner F, Weins A, Golub TR, Lander ES, Greka A. Small Molecule Targets TMED9 and Promotes Lysosomal Degradation to Reverse Proteinopathy. Cell. 2019 Jul 25;178(3):521-535.e23. doi: 10.1016/j.cell.2019.07.002. PMID: 31348885.

Sperling AS, Burgess M, Keshishian H, Gasser JA, Bhatt S, Jan M, Słabicki M, Sellar RS, Fink EC, Miller PG, Liddicoat BJ, Sievers QL, Sharma R, Adams DN, Olesinski EA, Fulciniti M, Udeshi ND, Kuhn E, Letai A, Munshi NC, Carr SA, Ebert BL. Patterns of substrate affinity, competition, and degradation kinetics underlie biological activity of thalidomide analogs. Blood. 2019 Jul 11;134(2):160-170. doi: 10.1182/blood.2019000789. Epub 2019 May 1. PMID: 31043423; PMCID: PMC6624968.

Starkweather,C.K., Uchida,N.. (2019). Dopamine reward prediction errors: the interplay between experiments and theory In Gazzaniga,M. (Ed.), The Cognitive Neurosciences, 6th edition (pp. 577-588). Cambridge: MIT Press.

Schwartz AL, Basilico MF, Friedman JL. Lactates and Local Knowledge - A Parable of Teamwork. N Engl J Med. 2019 Apr 11;380(15):1392-1393. doi: 10.1056/NEJMp1815228. PubMed PMID: 30970185.

Beaulieu-Laroche L, Toloza EHS, Brown NJ, Harnett MT. Widespread and Highly Correlated Somato-dendritic Activity in Cortical Layer 5 Neurons. Neuron. 2019 Jul 17;103(2):235-241.e4. doi: 10.1016/j.neuron.2019.05.014. Epub 2019 Jun 6. PMID: 31178115; PMCID: PMC6639136.

Shen K, Valenstein ML, Gu X, Sabatini DM. Arg-78 of Nprl2 catalyzes GATOR1-stimulated GTP hydrolysis by the Rag GTPases. J Biol Chem. 2019 Feb 22;294(8):2970-2975. doi: 10.1074/jbc.AC119.007382. Epub 2019 Jan 16. PubMed PMID: 30651352; PubMed Central PMCID: PMC6393612.

Young JG, Vatsa R, Murray EJ, Hernán MA. Interval-cohort designs and bias in the estimation of per-protocol effects: a simulation study. Trials. 2019 Sep 5;20(1):552. doi: 10.1186/s13063-019-3577-z. PMID: 31488202; PMCID: PMC6729016.

Kotliar D*, Veres A*, Nagy MA, Tabrizi S, Hodis E, Melton DA, Sabeti PC. Identifying gene expression programs of cell-type identity and cellular activity with single-cell RNA-Seq. Elife. 2019 Jul 8;8:e43803. doi: 10.7554/eLife.43803. PMID: 31282856; PMCID: PMC6639075.

Taylor JL, Debost JPG, Morton SU, Wigdor EM, Heyne HO, Lal D, Howrigan DP, Bloemendal A, Larsen JT, Kosmicki JA, Weiner DJ, Homsy J, Seidman JG, Seidman CE, Agerbo E, McGrath JJ, Mortensen PB, Petersen L, Daly MJ, Robinson EB. Paternal-age-related de novo mutations and risk for five disorders. Nat Commun. 2019 Jul 10;10(1):3043. doi: 10.1038/s41467-019-11039-6. PMID: 31292440; PMCID: PMC6620346.

Miller BC, Sen DR, Al Abosy R, Bi K, Virkud YV, LaFleur MW, Yates KB, Lako A, Felt K, Naik GS, Manos M, Gjini E, Kuchroo JR, Ishizuka JJ, Collier JL, Griffin GK, Maleri S, Comstock DE, Weiss SA, Brown FD, Panda A, Zimmer MD, Manguso RT, Hodi FS, Rodig SJ, Sharpe AH, Haining WN. Subsets of exhausted CD8+ T cells differentially mediate tumor control and respond to checkpoint blockade. Nat Immunol. 2019 Mar;20(3):326-336. doi: 10.1038/s41590-019-0312-6. Epub 2019 Feb 18. Erratum in: Nat Immunol. 2019 Nov;20(11):1556. PMID: 30778252; PMCID: PMC6673650.

Miller BC, Sen DR, Al Abosy R, Bi K, Virkud YV, LaFleur MW, Yates KB, Lako A, Felt K, Naik GS, Manos M, Gjini E, Kuchroo JR, Ishizuka JJ, Collier JL, Griffin GK, Maleri S, Comstock DE, Weiss SA, Brown FD, Panda A, Zimmer MD, Manguso RT, Hodi FS, Rodig SJ, Sharpe AH, Haining WN. Author Correction: Subsets of exhausted CD8+ T cells differentially mediate tumor control and respond to checkpoint blockade. Nat Immunol. 2019 Nov;20(11):1556. doi: 10.1038/s41590-019-0528-5. Erratum for: Nat Immunol. 2019 Mar;20(3):326-336. PMID: 31582823.

LaFleur MW, Nguyen TH, Coxe MA, Yates KB, Trombley JD, Weiss SA, Brown FD, Gillis JE, Coxe DJ, Doench JG, Haining WN, Sharpe AH. A CRISPR-Cas9 delivery system for in vivo screening of genes in the immune system. Nat Commun. 2019 Apr 10;10(1):1668. doi: 10.1038/s41467-019-09656-2. PubMed PMID: 30971695; PubMed Central PMCID: PMC6458184.

Hwang WL, Wolfson RL, Niemierko A, Marcus KJ, DuBois SG, Haas-Kogan D. Clinical Impact of Tumor Mutational Burden in Neuroblastoma. J Natl Cancer Inst. 2019 Jul 1;111(7):695-699. doi: 10.1093/jnci/djy157. PMID: 30307503; PMCID: PMC6624164.

Yan WX, Hunnewell P, Alfonse LE, Carte JM, Keston-Smith E, Sothiselvam S, Garrity AJ, Chong S, Makarova KS, Koonin EV, Cheng DR, Scott DA. Functionally diverse type V CRISPR-Cas systems. Science. 2019 Jan 4;363(6422):88-91. doi: 10.1126/science.aav7271. Epub 2018 Dec 6. PMID: 3052307

Faure G, Shmakov SA, Yan WX, Cheng DR, Scott DA, Peters JE, Makarova KS, Koonin EV. CRISPR-Cas in mobile genetic elements: counter-defence and beyond. Nat Rev Microbiol. 2019 Aug;17(8):513-525. doi: 10.1038/s41579-019-0204-7. PMID: 31165781.7.

Ma L, Dichwalkar T, Chang JYH, Cossette B, Garafola D, Zhang AQ, Fichter M, Wang C, Liang S, Silva M, Kumari S, Mehta NK, Abraham W, Thai N, Li N, Wittrup KD, Irvine DJ. Enhanced CAR-T cell activity against solid tumors by vaccine boosting through the chimeric receptor. Science. 2019 Jul 12;365(6449):162-168. doi: 10.1126/science.aav8692. PubMed PMID: 31296767.

Zhang Z, Gothe F, Pennamen P, James JR, McDonald D, Mata CP, Modis Y, Alazami AM, Acres M, Haller W, Bowen C, Döffinger R, Sinclair J, Brothers S, Zhang Y, Matthews HF, Naudion S, Pelluard F, Alajlan H, Yamazaki Y, Notarangelo LD, Thaventhiran JE, Engelhardt KR, Al-Mousa H, Hambleton S, Rooryck C, Smith KGC, Lenardo MJ. Human interleukin-2 receptor β mutations associated with defects in immunity and peripheral tolerance. J Exp Med. 2019 Jun 3;216(6):1311-1327. doi: 10.1084/jem.20182304. Epub 2019 Apr 30. PMID: 31040185; PMCID: PMC6547869.

Ziegler CGK, Kim J, Piersanti K, Oyler-Yaniv A, Argyropoulos KV, van den Brink MRM, Palomba ML, Altan-Bonnet N, Altan-Bonnet G. Constitutive Activation of the B Cell Receptor Underlies Dysfunctional Signaling in Chronic Lymphocytic Leukemia. Cell Rep. 2019 Jul 23;28(4):923-937.e3. doi: 10.1016/j.celrep.2019.06.069. PMID: 31340154.

 

2018

Myhrvold C, Freije CA, Gootenberg JS, Abudayyeh OO, Metsky HC, Durbin AF, Kellner MJ, Tan AL, Paul LM, Parham LA, Garcia KF, Barnes KG, Chak B, Mondini A,  Nogueira ML, Isern S, Michael SF, Lorenzana I, Yozwiak NL, MacInnis BL, Bosch I,  Gehrke L, Zhang F, Sabeti PC. Field-deployable viral diagnostics using CRISPR-Cas13. Science. 2018 Apr 27;360(6387):444-448. doi: 10.1126/science.aas8836. PubMed PMID: 29700266.

Gootenberg JS, Abudayyeh OO, Kellner MJ, Joung J, Collins JJ, Zhang F. Multiplexed and portable nucleic acid detection platform with Cas13, Cas12a, and Csm6. Science. 2018 Apr 27;360(6387):439-444. doi: 10.1126/science.aaq0179. Epub  2018 Feb 15. PubMed PMID: 29449508; PubMed Central PMCID: PMC5961727.

Nishimasu H, Shi X, Ishiguro S, Gao L, Hirano S, Okazaki S, Noda T, Abudayyeh OO, Gootenberg JS, Mori H, Oura S, Holmes B, Tanaka M, Seki M, Hirano H, Aburatani H, Ishitani R, Ikawa M, Yachie N, Zhang F, Nureki O. Engineered CRISPR-Cas9 nuclease with expanded targeting space. Science. 2018 Sep 21;361(6408):1259-1262. doi: 10.1126/science.aas9129. Epub 2018 Aug 30. PubMed PMID: 30166441

Sharma A, Toepfer CN, Ward T, Wasson L, Agarwal R, Conner DA, Hu JH, Seidman CE. CRISPR/Cas9-Mediated Fluorescent Tagging of Endogenous Proteins in Human Pluripotent Stem Cells. Curr Protoc Hum Genet. 2018 Jan 24;96:21.11.1-21.11.20. doi: 10.1002/cphg.52. PubMed PMID: 29364519; PubMed Central PMCID: PMC5785097.

Berne C, Ellison CK, Agarwal R, Severin GB, Fiebig A, Morton RI 3rd, Waters CM, Brun YV. Feedback regulation of Caulobacter crescentus holdfast synthesis by flagellum assembly via the holdfast inhibitor HfiA. Mol Microbiol. 2018 Oct;110(2):219-238. doi: 10.1111/mmi.14099. Epub 2018 Oct 5. PubMed PMID: 30079982; PubMed Central PMCID: PMC6195837.

Cai T, Zhang Y, Ho YL, Link N, Sun J, Huang J, Cai TA, Damrauer S, Ahuja Y, Honerlaw J, Huang J, Costa L, Schubert P, Hong C, Gagnon D, Sun YV, Gaziano JM, Wilson P, Cho K, Tsao P, O'Donnell CJ, Liao KP; VA Million Veteran Program. Association of Interleukin 6 Receptor Variant With Cardiovascular Disease Effects of Interleukin 6 Receptor Blocking Therapy: A Phenome-Wide Association Study. JAMA Cardiol. 2018 Sep 1;3(9):849-857. doi: 10.1001/jamacardio.2018.2287. PubMed PMID: 30090940.

Short FL, Akusobi C, Broadhurst WR, Salmond GPC. The bacterial Type III toxin-antitoxin system, ToxIN, is a dynamic protein-RNA complex with stability-dependent antiviral abortive infection activity. Sci Rep. 2018 Jan 17;8(1):1013. doi: 10.1038/s41598-017-18696-x. PubMed PMID: 29343718; PubMed Central PMCID: PMC5772629.

Allsop SA, Wichmann R, Mills F, Burgos-Robles A, Chang CJ, Felix-Ortiz AC, Vienne A, Beyeler A, Izadmehr EM, Glober G, Cum MI, Stergiadou J, Anandalingam KK, Farris K, Namburi P, Leppla CA, Weddington JC, Nieh EH, Smith AC, Ba D, Brown EN, Tye KM. Corticoamygdala Transfer of Socially Derived Information Gates Observational Learning. Cell. 2018 May 31;173(6):1329-1342.e18. doi: 10.1016/j.cell.2018.04.004. Epub 2018 May 3. PubMed PMID: 29731170.

Zhang Y, Malem-Shinitski N, Allsop SA, M Tye K, Ba D. Estimating a Separably Markov Random Field from Binary Observations. Neural Comput. 2018 Apr;30(4):1046-1079. doi: 10.1162/neco_a_01059. Epub 2018 Jan 30. PubMed PMID: 29381446.

Matthew Basilico, Abhiram Bhashyam, Emma Harrington, Marilyn Heng. Initial Opioid Supply Influences Long-Term Use and Doctor Shopping: An Instrumental Variables Approach, American College of Surgeons Clinical Congress. Boston, MA October 2018. Winner: Excellence in Research Award (Health Policy).

Matthew Basilico, Abhiram Bhashyam, Marilyn Heng. Racial bias in initial opioid prescribing for orthopaedic trauma patients. Boston, MA October 2018.

Abhiram Bhashyam, Matthew Basilico, Michael Weaver, Mitchel Harris, Marilyn Heng. An analysis of initial post-operative opioid prescribing patterns in orthopaedic trauma and a technique to determine prescribing guidelines. American Academy of Orthopaedic Surgeons Annual Meeting. 2018

Matthew Basilico, Abhiram R. Bhashyam, Mitchel Harris, Marilyn Heng. Prescription opioid type is not associated with increased risk of long-term use in opiate naïve patients after orthopaedic surgery. Accepted ASSH 2018.

Bhashyam AR, Basilico M, Weaver MJ, Harris MB, Heng M. Using historical variation in opioid prescribing immediately after fracture surgery to guide maximum initial prescriptions. J Orthop Trauma. 2018 Dec 12. doi: 10.1097/BOT.0000000000001392. [Epub ahead of print] PubMed PMID: 30570619.

Basilico M, Bhashyam AR, Harris MB, Heng M. Prescription Opioid Type and the Likelihood of Prolonged Opioid Use After Orthopaedic Surgery. J Am Acad Orthop Surg. 2018 Oct 4. doi: 10.5435/JAAOS-D-17-00663. [Epub ahead of print] PubMed PMID: 30289795.

Baum, M. L., Savulescu, J., Singh, I. in press. Chapter 5: A New Ethics For 21st Century Psychiatry. In: Geddes, J., Andreasen, N., and Goodwin, G. (eds). New Oxford Textbook of Psychiatry (3rd edition).

Saunders A, Macosko EZ, Wysoker A, Goldman M, Krienen FM, de Rivera H, Bien E,, Baum M, Bortolin L, Wang S, Goeva A, Nemesh J, Kamitaki N, Brumbaugh S, Kulp D, McCarroll SA. Molecular Diversity and Specializations among the Cells of the Adult Mouse Brain. Cell. 2018 Aug 9;174(4):1015-1030.e16. doi: 10.1016/j.cell.2018.07.028. PubMed PMID: 30096299; PubMed Central PMCID:
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Bodnar NO, Kim KH, Ji Z, Wales TE, Svetlov V, Nudler E, Engen JR, Walz T, Rapoport TA. Structure of the Cdc48 ATPase with its ubiquitin-binding cofactor Ufd1-Npl4. Nat Struct Mol Biol. 2018 Jul;25(7):616-622. doi: 10.1038/s41594-018-0085-x. Epub 2018 Jul 2. PubMed PMID: 29967539; PubMed Central PMCID: PMC6044470.

Schmalzer, Sigrid, Daniel S. Chard, and Alyssa Botelho, eds. Science for the People: Documents from America's Movement of Radical Scientists, 1969-1989. Amherst, MA: University of Massachusetts Press, 2018.

Botelho, Alyssa. "Biology and Medicine." In Science for the People: Documents from America's Movement of Radical Scientists, 1969-1989, edited by Sigrid Schmalzer, Daniel S. Chard, and Alyssa Botelho. Amherst, MA: University of Massachusetts Press, 2018.

Botelho, Alyssa. "Race and Gender." In Science for the People: Documents from America's Movement of Radical Scientists, 1969-1989, edited by Sigrid Schmalzer, Daniel S. Chard, and Alyssa Botelho. Amherst, MA: University of Massachusetts Press, 2018.

Pan J, Meyers RM, Michel BC, Mashtalir N, Sizemore AE, Wells JN, Cassel SH, Vazquez F, Weir BA, Hahn WC, Marsh JA, Tsherniak A, Kadoch C. Interrogation of Mammalian Protein Complex Structure, Function, and Membership Using Genome-Scale  Fitness Screens. Cell Syst. 2018 May 23;6(5):555-568.e7. doi: 10.1016/j.cels.2018.04.011. Epub 2018 May 16. PubMed PMID: 29778836.

Mashtalir N, D'Avino AR, Michel BC, Luo J, Pan J, Otto JE, Zullow HJ, McKenzie ZM, Kubiak RL, St Pierre R, Valencia AM, Poynter SJ, Cassel SH, Ranish JA, Kadoch C. Modular Organization and Assembly of SWI/SNF Family Chromatin Remodeling Complexes. Cell. 2018 Oct 18. pii: S0092-8674(18)31244-3. doi: 10.1016/j.cell.2018.09.032. [Epub ahead of print] PubMed PMID: 30343899.

Brown JM, Campbell JP, Beers A, Chang K, Ostmo S, Chan RVP, Dy J, Erdogmus D, Ioannidis S, Kalpathy-Cramer J, Chiang MF; Imaging and Informatics in Retinopathy of Prematurity (i-ROP) Research Consortium. Automated Diagnosis of Plus Disease in Retinopathy of Prematurity Using Deep Convolutional Neural Networks. JAMA Ophthalmol. 2018 May 2. doi: 10.1001/jamaophthalmol.2018.1934. [Epub ahead of print] PubMed PMID: 29801159.

Chang K, Balachandar N, Lam C, Yi D, Brown J, Beers A, Rosen B, Rubin DL, Kalpathy-Cramer J. Distributed deep learning networks among institutions for medical imaging. J Am Med Inform Assoc. 2018 Mar 29. doi: 10.1093/jamia/ocy017. [Epub ahead of print] PubMed PMID: 29617797.

Tang L, Deng L, Bai HX, Sun J, Neale N, Wu J, Wang Y, Chang K, Huang RY, Zhang PJ, Li X, Xiao B, Cao Y, Tao Y, Yang L. Reduced expression of DNA repair genes and chemosensitivity in 1p19q codeleted lower-grade gliomas. J Neurooncol. 2018 Jun 19. doi: 10.1007/s11060-018-2915-4. [Epub ahead of print] PubMed PMID: 29923053

Winzeck S, Hakim A, McKinley R, Pinto JAADSR, Alves V, Silva C, Pisov M, Krivov E, Belyaev M, Monteiro M, Oliveira A, Choi Y, Paik MC, Kwon Y, Lee H, Kim BJ, Won JH, Islam M, Ren H, Robben D, Suetens P, Gong E, Niu Y, Xu J, Pauly JM, Lucas C, Heinrich MP, Rivera LC, Castillo LS, Daza LA, Beers AL, Arbelaezs P, Maier O, Chang K, Brown JM, Kalpathy-Cramer J, Zaharchuk G, Wiest R, Reyes M. ISLES 2016 and 2017-Benchmarking Ischemic Stroke Lesion Outcome Prediction Based on Multispectral MRI. Front Neurol. 2018 Sep 13;9:679. doi: 10.3389/fneur.2018.00679. eCollection 2018. PubMed PMID: 30271370; PubMed Central PMCID: PMC6146088.

Tyssowski KM, DeStefino NR, Cho JH, Dunn CJ, Poston RG, Carty CE, Jones RD, Chang SM, Romeo P, Wurzelmann MK, Ward JM, Andermann ML, Saha RN, Dudek SM, Gray  JM. Different Neuronal Activity Patterns Induce Different Gene Expression Programs. Neuron. 2018 May 2;98(3):530-546.e11. doi: 10.1016/j.neuron.2018.04.001. Epub 2018 Apr 19. PubMed PMID: 29681534; PubMed Central PMCID: PMC5934296.

Lima Queiroz A, Zhang B, Comstock DE, Hao Y, Eriksson M, Hydbring P, Vakifahmetoglu-Norberg H, Norberg E. miR-126-5p targets Malate Dehydrogenase 1 in non-small cell lung carcinomas. Biochem Biophys Res Commun. 2018 May 5;499(2):314-320. doi: 10.1016/j.bbrc.2018.03.154. Epub 2018 Mar 26. PubMed PMID: 29574159.

DiRisio AC, Muskens IS, Cote DJ, Babu M, Gormley WB, Smith TR, Moojen WA, Broekman ML. Oversight and Ethical Regulation of Conflicts of Interest in Neurosurgery in the United States. Neurosurgery. 2018 May 30. doi: 10.1093/neuros/nyy227. [Epub ahead of print] PubMed PMID: 29850841.

Zaidi HA, Penn DL, Cote DJ, Laws ER Jr. Root cause analysis of diagnostic and  surgical failures in the treatment of suspected Cushing's disease. J Clin Neurosci. 2018 Jul;53:153-159. doi: 10.1016/j.jocn.2018.04.055. Epub 2018 Apr 30. PubMed PMID: 29716804.

Martin E, Muskens IS, Senders JT, Cote DJ, Smith TR, Broekman MLD. A nationwide analysis of 30-day adverse events, unplanned readmission, and length of hospital stay after peripheral nerve surgery in extremities and the brachial plexus. Microsurgery. 2018 Apr 15. doi: 10.1002/micr.30330. PubMed PMID: 29656387.

Zaki MM, Cote DJ, Muskens IS, Smith TR, Broekman ML. Defining Innovation in Neurosurgery: Results from an International Survey. World Neurosurg. 2018 Jun;114:e1038-e1048. doi: 10.1016/j.wneu.2018.03.142. Epub 2018 Mar 29. PubMed PMID: 29604357.

Alotaibi NM, Noormohamed N, Cote DJ, Alharthi S, Doucette J, Zaidi HA, Mekary  RA, Smith TR. Physiologic Growth Hormone-Replacement Therapy and Craniopharyngioma Recurrence in Pediatric Patients: A Meta-Analysis. World Neurosurg. 2018 Jan;109:487-496.e1. doi: 10.1016/j.wneu.2017.09.164. Epub 2017 Oct 4. Review. PubMed PMID: 28987837; PubMed Central PMCID: PMC5729106.

Senders JT, Goldhaber NH, Cote DJ, Muskens IS, Dawood HY, De Vos FYFL, Gormley WB, Smith TR, Broekman MLD. Venous thromboembolism and intracranial hemorrhage after craniotomy for primary malignant brain tumors: a National Surgical Quality  Improvement Program analysis. J Neurooncol. 2018 Jan;136(1):135-145. doi: 10.1007/s11060-017-2631-5. Epub 2017 Oct 16. PubMed PMID: 29039075; PubMed Central PMCID: PMC5754452.

Burke WT, Cote DJ, Iuliano SI, Zaidi HA, Laws ER. A practical method for prevention of readmission for symptomatic hyponatremia following transsphenoidal surgery. Pituitary. 2018 Feb;21(1):25-31. doi: 10.1007/s11102-017-0843-5. PubMed  PMID: 29075986.

Almutairi RD, Muskens IS, Cote DJ, Dijkman MD, Kavouridis VK, Crocker E, Ghazawi K, Broekman MLD, Smith TR, Mekary RA, Zaidi HA. Gross total resection of  pituitary adenomas after endoscopic vs. microscopic transsphenoidal surgery: a meta-analysis. Acta Neurochir (Wien). 2018 Jan 6. doi: 10.1007/s00701-017-3438-z. [Epub ahead of print] Review. PubMed PMID: 29307020.

Altuwaijri N, Cote DJ, Lamba N, Albenayan W, Ren SP, Zaghloul I, Doucette J, Zaidi HA, Mekary RA, Smith TR. Headache Resolution After Rathke Cleft Cyst Resection: A Meta-Analysis. World Neurosurg. 2018 Jan 5. pii: S1878-8750(18)30025-1. doi: 10.1016/j.wneu.2017.12.170. PubMed PMID: 29309984.

Alreshidi M, Cote DJ, Dasenbrock HH, Acosta M, Can A, Doucette J, Simjian T, Hulou MM, Wheeler LA, Huang K, Zaidi HA, Du R, Aziz-Sultan MA, Mekary RA, Smith TR. Coiling Versus Microsurgical Clipping in the Treatment of Unruptured Middle Cerebral Artery Aneurysms: A Meta-Analysis. Neurosurgery. 2018 Feb 9. doi: 10.1093/neuros/nyx623. PubMed PMID: 29438551.

Senders JT, Muskens IS, Cote DJ, Goldhaber NH, Dawood HY, Gormley WB, Broekman MLD, Smith TR. Thirty-Day Outcomes After Craniotomy for Primary Malignant Brain Tumors: A National Surgical Quality Improvement Program Analysis. Neurosurgery. 2018 Feb 22. doi: 10.1093/neuros/nyy001. PubMed PMID: 29481613.

Ostrom Q*, Cote DJ*, Ascha M, Kruchko C, Barnholtz-Sloan JS. "Patterns of adult glioma incidence and survival by race and ethnicity in the United States from 2000-2014." JAMA Oncology. 2018 Jun. PMID: 29931168; PubMed Central PMCID: PMC6143018.

Cote DJ, Downer MK, Smith TR, Smith-Warner SA, Egan KM, Stampfer MJ. Height, waist circumference, body mass index, and body somatotype across the life course  and risk of glioma. Cancer Causes Control. 2018 Aug;29(8):707-719. doi: 10.1007/s10552-018-1052-x. Epub 2018 Jun 26. PubMed PMID: 29943102.

Coulter ME, Dorobantu CM, Lodewijk GA, Delalande F, Cianferani S, Ganesh VS, Smith RS, Lim ET, Xu CS, Pang S, Wong ET, Lidov HGW, Calicchio ML, Yang E, Gonzalez DM, Schlaeger TM, Mochida GH, Hess H, Lee WA, Lehtinen MK, Kirchhausen T, Haussler D, Jacobs FMJ, Gaudin R, Walsh CA. The ESCRT-III Protein CHMP1A Mediates Secretion of Sonic Hedgehog on a Distinctive Subtype of Extracellular Vesicles. Cell Rep. 2018 Jul 24;24(4):973-986.e8. doi: 10.1016/j.celrep.2018.06.100. PMID: 30044992; PMCID: PMC6178983.

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Panchakshari RA, Zhang X, Kumar V, Du Z, Wei PC, Kao J, Dong J, Alt FW. DNA double-strand break response factors influence end-joining features of IgH class switch and general translocation junctions. Proc Natl Acad Sci U S A. 2018 Jan 23;115(4):762-767. doi: 10.1073/pnas.1719988115. Epub 2018 Jan 8. PubMed PMID: 29311308; PubMed Central PMCID: PMC5789958.

Shao P, Seiler TG, Eltony AM, Ramier A, Kwok SJJ, Scarcelli G, Ii RP, Yun SH.  Effects of Corneal Hydration on Brillouin Microscopy In Vivo. Invest Ophthalmol Vis Sci. 2018 Jun 1;59(7):3020-3027. doi: 10.1167/iovs.18-24228. PubMed PMID: 30025137; PubMed Central PMCID: PMC5995485

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Lu X, Fernando T, Lossos C, Yusufova N, Liu F, Fontán L, Durant M, Geng H, Melnick J, Luo Y, Vega F, Moy V, Inghirami G, Nimer S, Melnick AM, Lossos IS. PRMT5 interacts with the BCL6 oncoprotein and is required for germinal center formation and lymphoma cell survival. Blood. 2018 Aug 6. pii: blood-2018-02-831438. doi: 10.1182/blood-2018-02-831438. [Epub ahead of print] PubMed PMID: 30082494.

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