BBS Faculty Member - Radhika Subramanian

Radhika Subramanian

Department of Genetics

Massachusetts General Hospital
Department of Molecular Biology, Simches 7
185 Cambridge St.
Boston, MA 02114
Tel: 617-724-4062
Fax: 617-726-6893
Visit my lab page here.

For a living cell to function properly, its cellular processes must be strictly controlled not only in time but also in space. We are interested in how intracellular spatial organization on the micron-length scale is achieved by nanometer-sized proteins. We investigate this problem in the context of the microtubule cytoskeleton.

In eukaryotes, a wide range of cellular processes such as cell division, cell migration, axonal growth and assembly of flagella and cilia rely on the dynamic and precise organization of microtubules into specialized architectures. Increasingly sophisticated genomic and proteomic analyses have now provided us with a near-complete ‘parts-list’ of the proteins involved in assembling these microtubule-based structures. However, the molecular mechanisms underlying the proper formation and activity of even the minimal functional units of these structures still remain poorly understood. We aim to bridge this knowledge gap by reconstituting minimal units of microtubule-based architectures
in vitro from the individual components. We use a diverse set of experimental tools in our endeavor: integrating angstrom and nanometer-length scale information from X-ray crystallography and single-molecule visualization techniques with micron-length scale analysis of microtubule architectures using multi-color TIRF microscopy-based in vitro assays and cellular analyses of the cytoskeletal structures.

Currently, our research is focused on microtubule organization during cell division. Specifically, we are interested in the molecular mechanisms underlying the assembly of the spindle midzone, an interdigitating array of microtubules, which emerges between segregating chromosomes at anaphase. In current models, the midzone play a key role in specifying the site of cell division by keeping the segregated chromosomes apart and promoting the ingression of the cell cleavage furrow. However, we still do not understand how even the basic features of this structure such as shape and size are determined. This is largely because midzone assembly is a complex process involving a number of mechanical (e.g. motor proteins) and regulatory components (e.g. kinases), many of which have multiple functions during mitosis. To overcome this challenge, we take a reductionist approach and build minimal units of this cell division apparatus from purified proteins to address how the collective activity of midzone proteins contributes to its proper assembly and function. We are also using this approach to dissect the molecular mechanisms underlying microtubule organization in other cellular contexts.

Last Update: 10/1/2020


For a complete listing of publications click here.



He M, Subramanian R, Bangs F, Omelchenko T, Liem KF Jr., Kapoor TM and Anderson KV (2014) The Kinesin-4 protein KIF7 regulates mammalian hedgehog signaling by organizing the cilia tip compartment. Nat. Cell Biol. Jul; 16(7):663-72.
Comment in: Nat Rev Mol Cell Biol. 2014 Aug;15(8):498-9
Preview in: Nat Cell Biol. 2014 Jul 1;16(7):623-5

Subramanian R, Ti SC, Tan L, Darst SA, Kapoor TM (2013) Marking and measuring single microtubules by PRC1 and kinesin-4. Cell. July 18; 154(2):377-90.
Preview in: Dev Cell 2013 26(2);118-20
Recommended by Faculty of 1000

Subramanian R, Kapoor TM (2012) Building complexity: insights into self-organized assembly of microtubule-based architectures. Dev. Cell. 23(5):874-85. Review Article

Subramanian R, Wilson-Kubalek EM, Arthur CP, Bick MJ, Campbell EA, Darst SA, Milligan RA, Kapoor TM (2010) Insights into antiparallel microtubule crosslinking by PRC1, a conserved nonmotor microtubule binding protein. Cell. Aug 6;142(3):433-43.
Comment in: Nat Rev Mol Cell Biol. 2010 Sep;11(9):602-3
Preview in: Cell. 2010 Aug 6;142(3):364-7
Recommended by Faculty of 1000

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